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          • Home
          • › Search Tool
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          • › Mm01296312_m1
          See other RARA GE Assays ›
          Gene Symbol:
          Rara
          Gene Name:
          retinoic acid receptor, alpha
          Gene Aliases:
          Nr1b1, RAR, RARalpha1
          Chromosome Location:
          Chr.11: 98927809 - 98974942 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01296312_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Rara
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001176528.1 NP_001169999.1 5 - 6 1295 69
          NM_001177302.1 NP_001170773.1 7 - 8 1500 69
          NM_001177303.1 NP_001170774.1 6 - 7 1245 69
          NM_009024.2 NP_033050.2 6 - 7 1367 69
          GenBank mRNA AB221572.1 - 5 - 6 815 69
          AK042163.1 - 6 - 7 1246 69
          AK153644.1 - 5 - 6 841 69
          AK154623.1 - 6 - 7 1340 69
          AK170956.1 - 5 - 6 1295 69
          BC010216.1 - 6 - 7 1365 3498142 69
          BC038266.1 - 5 - 6 1364 69
          BC040383.1 - 7 - 8 1500 69
          CT010231.1 - 5 - 6 810 69
          S56656.1 - 6 - 7 1347 69

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1100001587.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Rara

          Panther Classification:

          Molecular Function -

          C4 zinc finger nuclear receptor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          ureteric bud development
          neural tube closure
          glandular epithelial cell development
          outflow tract septum morphogenesis
          growth plate cartilage development
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          transcription from RNA polymerase II promoter
          protein phosphorylation
          signal transduction
          germ cell development
          spermatogenesis
          positive regulation of cell proliferation
          negative regulation of cell proliferation
          male gonad development
          positive regulation of gene expression
          negative regulation of gene expression
          positive regulation of phosphatidylinositol 3-kinase signaling
          negative regulation of translation
          regulation of granulocyte differentiation
          negative regulation of granulocyte differentiation
          embryonic camera-type eye development
          regulation of myelination
          response to retinoic acid
          negative regulation of interferon-gamma production
          negative regulation of tumor necrosis factor production
          positive regulation of interleukin-13 production
          positive regulation of interleukin-4 production
          positive regulation of interleukin-5 production
          multicellular organism growth
          regulation of apoptotic process
          negative regulation of apoptotic process
          apoptotic cell clearance
          steroid hormone mediated signaling pathway
          regulation of phosphatidylinositol 3-kinase activity
          response to ethanol
          negative regulation of cell differentiation
          positive regulation of T-helper 2 cell differentiation
          positive regulation of neuron differentiation
          positive regulation of cell cycle
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          negative regulation of translational initiation
          regulation of synaptic plasticity
          retinoic acid receptor signaling pathway
          positive regulation of binding
          positive regulation of protein kinase B signaling
          ventricular cardiac muscle cell differentiation
          Sertoli cell fate commitment
          limb development
          face development
          bone development
          trachea cartilage development
          chondroblast differentiation
          negative regulation of cartilage development
          positive regulation of ERK1 and ERK2 cascade
          cellular response to lipopolysaccharide
          cellular response to retinoic acid
          cellular response to estrogen stimulus
          translation repressor activity, nucleic acid binding
          regulatory region DNA binding
          RNA polymerase II regulatory region sequence-specific DNA binding
          RNA polymerase II regulatory region DNA binding
          retinoic acid binding
          DNA binding
          transcription factor activity, sequence-specific DNA binding
          steroid hormone receptor activity
          retinoic acid receptor activity
          transcription coactivator activity
          transcription corepressor activity
          RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
          receptor binding
          protein binding
          transcription factor binding
          drug binding
          zinc ion binding
          enzyme binding
          protein domain specific binding
          chromatin DNA binding
          phosphatidylinositol 3-kinase regulator activity
          histone deacetylase binding
          protein kinase B binding
          sequence-specific DNA binding
          transcription regulatory region DNA binding
          retinoic acid-responsive element binding
          metal ion binding
          protein heterodimerization activity
          mRNA 5'-UTR binding
          protein kinase A binding
          alpha-actinin binding

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