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          • Home
          • › Search Tool
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          • › Mm01324605_m1
          See other RTF1 GE Assays ›
          Gene Symbol:
          Rtf1
          Gene Name:
          Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
          Gene Aliases:
          2900005O08Rik, 6530416A09Rik, AI853581, AU043144, AW553985, Gtl7, cbp82
          Chromosome Location:
          Chr.2: 119675068 - 119735407 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01324605_m1
          Best Coverage
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
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          • Genomic Map
          • Assay Details
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          Genomic Map

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          Assay Details

          Gene Symbol: Rtf1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_030112.2 NP_084388.2 15 - 16 1837 60
          GenBank mRNA AK135633.1 - 9 - 10 905 60
          BC117848.1 - 15 - 16 1689 40093717 60
          BC117849.1 - 15 - 16 1689 40093724 60
          CN532066.1 - 5 - 6 353 60

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0200001779.mm.1

          Set Membership:

          Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          endodermal cell fate commitment
          blastocyst growth
          transcription, DNA-templated
          DNA-templated transcription, initiation
          regulation of transcription, DNA-templated
          Wnt signaling pathway
          histone modification
          stem cell population maintenance
          positive regulation of transcription elongation from RNA polymerase II promoter
          positive regulation of transcription by RNA polymerase II
          positive regulation of histone H3-K4 methylation
          histone H3-K4 trimethylation
          DNA binding
          single-stranded DNA binding
          RNA binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR0200013380.mm.1 TC0200001779.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0200013380.mm.1 NM_030112.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0200013380.mm.1 NM_030112.2 Refseq
          Affymetrix Mouse Clariom S Array PSR0200013379.mm.1 TC0200001779.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0200013379.mm.1 NM_030112.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0200013379.mm.1 NM_030112.2 Refseq

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