Name: [Mm01975360_s1] [1700047M11Rik]
Creator: Thermo Fisher Scientific
Keywords: [1700047M11Rik] Assay, [RIKEN cDNA 1700047M11 gene] Assay

Assay Details

Gene Symbol: 1700047M11Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015458.1		2	482		138
GenBank mRNA	AK006718.1	-	2	266		138
	AK019698.1	-	2	261		138
	AK047804.1	-		2243		138
	BC048591.1	-	2	482		138

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BB360438.2	-	1	513	Chr. 1 - 182302573 - 182303247 [+] on Build GRCm38	138
GenBankmRNA	BY612529.1	-	2	210	Chr. 1 - 182301107 - 182303247 [+] on Build GRCm38	138
GenBankmRNA	BE988264.1	-	1		Chr. 1 - 182302994 - 182303248 [-] on Build GRCm38	138
GenBankmRNA	BM939824.1	-	1	86	Chr. 1 - 182303000 - 182303248 [+] on Build GRCm38	138
GenBankmRNA	BY715448.1	-	2	261	Chr. 1 - 182301056 - 182303248 [+] on Build GRCm38	138
GenBankmRNA	BY608701.1	-	2	244	Chr. 1 - 182301072 - 182303247 [+] on Build GRCm38	138

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	degenerative spermatocyte homolog 1 (Drosophila)	Degs1	AA536663, Degs, Des1, Mdes	-20.2kb	Anti-sense	Chr. 1 - 182275770 - 182282759 on NCBI Build GRCm38
Downstream	F-box protein 28	Fbxo28	4833428J17Rik, 5730505P19Rik, D1Ertd578e, Fbx28, mKIAA0483	9.9kb	Anti-sense	Chr. 1 - 182313102 - 182341606 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100001744.mm.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_66_P129893	NR_015458.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_66_P129893	AK006718.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	682022	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	332372	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	131246	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	41717	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	614970	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	457941	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	742134	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	102548	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	136334	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P102367	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P102367	-	-
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P129893	NR_015458.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P129893	AK006718.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P102367	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885934	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885924	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885942	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885917	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885930	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885943	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P00409110	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885935	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P00826517	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885939	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885941	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885928	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885938	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P00686487	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885921	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885937	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885926	-	-
Agilent Six_ChIP_01_of_03_v2	A_68_P20885919	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1438044_PM_at	-	-
Mouse Genome 430 2.0 Array	1438044_PM_at	-	-
Mouse Genome 430 2.0 Array	1438044_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	67330_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	67330_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0100014543.mm.1	TC0100001744.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100014543.mm.1	NR_015458.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014543.mm.1	NR_015458.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014550.mm.1	TC0100001744.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100014550.mm.1	NR_015458.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014550.mm.1	NR_015458.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014551.mm.1	TC0100001744.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100014551.mm.1	NR_015458.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014551.mm.1	NR_015458.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014545.mm.1	TC0100001744.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100014545.mm.1	NR_015458.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014545.mm.1	NR_015458.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014541.mm.1	TC0100001744.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100014541.mm.1	NR_015458.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100014541.mm.1	NR_015458.1	Refseq
Mouse Expression Set 430	1438044_PM_at	-	-
Mouse Expression Set 430	1438044_at	-	-
Affymetrix HT Mouse Genome 430B Array	1438044_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1438044_at	-	-

Availability	Made To Order
Catalog #	4426961
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System Message

Genomic Map