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Gene Symbol:
Clcn5
Gene Name:
Gene Aliases:
Species:
Mouse
Species Specific ID (Flybase ID):
Assay ID Mm03940828_s1
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Catalog # 4426961
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Assay Details

Gene Symbol: Clcn5
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
GenBank mRNA AK017285.1 - 1 849 69
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BE457089.1 - 1 Chr. X - 7153811 - 7154384 [+] on Build GRCm38 69
GenBankmRNA AW044873.1 - 1 Chr. X - 7153810 - 7154379 [+] on Build GRCm38 69
GenBankmRNA AI316524.1 - 1 Chr. X - 7154222 - 7171224 [+] on Build GRCm38 69
GenBankmRNA BI143525.1 - 1 37 Chr. X - 7154193 - 7154329 [-] on Build GRCm38 69
GenBankmRNA BE946423.1 - 1 Chr. X - 7154190 - 7154623 [+] on Build GRCm38 69
GenBankmRNA AV495336.1 - 1 112 Chr. X - 7154095 - 7154403 [-] on Build GRCm38 69
GenBankmRNA BF471166.1 - 1 456 Chr. X - 7154190 - 7154748 [-] on Build GRCm38 69
GenBankmRNA CB844684.1 - 1 541 Chr. X - 7154138 - 7154821 [-] on Build GRCm38 69
GenBankmRNA CJ191701.1 - 1 355 Chr. X - 7154206 - 7154647 [-] on Build GRCm38 69
GenBankmRNA AV008425.2 - 1 471 Chr. X - 7154213 - 7154763 [-] on Build GRCm38 69
GenBankmRNA CK790760.1 - 1 606 Chr. X - 7154118 - 7154854 [-] on Build GRCm38 69
GenBankmRNA BM933241.1 - 1 Chr. X - 7154234 - 7154883 [+] on Build GRCm38 69
GenBankmRNA BF227348.1 - 1 Chr. X - 7154206 - 7154696 [+] on Build GRCm38 69
GenBankmRNA AI314901.1 - 1 Chr. X - 7154235 - 7178441 [+] on Build GRCm38 69
GenBankmRNA BB308851.1 - 1 197 Chr. X - 7154211 - 7154471 [-] on Build GRCm38 69
GenBankmRNA CD351345.1 - 2 348 Chr. X - 7153943 - 7154679 [-] on Build GRCm38 69
GenBankmRNA BQ550986.1 - 1 446 Chr. X - 7154142 - 7154738 [-] on Build GRCm38 69
GenBankmRNA CF550861.1 - 1 Chr. X - 7154232 - 7155087 [+] on Build GRCm38 69
GenBankmRNA AA064186.1 - 1 227 Chr. X - 7153993 - 7154519 [-] on Build GRCm38 69
GenBankmRNA BI135288.1 - 1 Chr. X - 7154190 - 7154475 [+] on Build GRCm38 69
GenBankmRNA BX631374.1 - 1 Chr. X - 7154201 - 7154486 [+] on Build GRCm38 69

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream A kinase (PRKA) anchor protein 4 Akap4 AKAP-4,
AKAP82,
Fsc1,
PRKA4,
mAKAP82,
p82 		-75.2kb Anti-sense Chr. X - 7067515 - 7078609 on NCBI Build GRCm38
Downstream microRNA 500 Mir500 Mirn500,
mir-500,
mmu-mir-500 		82.5kb Sense Chr. X - 7237683 - 7237774 on NCBI Build GRCm38

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More Information


Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

Set Membership:

 Amplicon length less than or equal to 70 Detect Genomic DNA Mus musculus 1700 Both primers and probe map within a single exon

MicroArray Probes:

ABI


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