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Gene Symbol:
Pbx1
Gene Name:
Gene Aliases:
Species:
Mouse
Species Specific ID (Flybase ID):
Assay ID Mm03946188_s1
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Catalog # 4426961
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Assay Details

Gene Symbol: Pbx1
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001291508.1 NP_001278437.1 8 6911 103
NM_001291509.1 NP_001278438.1 7 6751 103
NM_183355.3 NP_899198.1 9 7024 103
GenBank mRNA AK083616.1 - 1 1550 103
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BE944030.1 - 1 Chr. 1 - 168153534 - 168153804 [+] on Build GRCm38 103
GenBankmRNA CF586477.1 - 1 Chr. 1 - 168153536 - 168154381 [+] on Build GRCm38 103
GenBankmRNA AI155560.1 - 1 Chr. 1 - 168153591 - 168153911 [+] on Build GRCm38 103
GenBankmRNA CJ258330.1 - 1 324 Chr. 1 - 168153551 - 168153989 [-] on Build GRCm38 103
GenBankmRNA BX636886.1 - 1 Chr. 1 - 168153547 - 168153900 [+] on Build GRCm38 103
GenBankmRNA BB448915.1 - 1 208 Chr. 1 - 168153551 - 168153862 [-] on Build GRCm38 103
GenBankmRNA BM203184.2 - 1 Chr. 1 - 168153551 - 168154213 [+] on Build GRCm38 103
GenBankmRNA CJ258792.1 - 1 390 Chr. 1 - 168153551 - 168154055 [-] on Build GRCm38 103
GenBankmRNA DV552784.1 - 1 317 Chr. 1 - 168153529 - 168153981 [-] on Build GRCm38 103
GenBankmRNA BF466686.1 - 1 212 Chr. 1 - 168153580 - 168153877 [-] on Build GRCm38 103
GenBankmRNA BB398026.1 - 1 206 Chr. 1 - 168153538 - 168153858 [-] on Build GRCm38 103
GenBankmRNA BB027467.1 - 1 170 Chr. 1 - 168153551 - 168153835 [-] on Build GRCm38 103
GenBankmRNA BB502650.1 - 1 199 Chr. 1 - 168153551 - 168153862 [-] on Build GRCm38 103
GenBankmRNA BG141998.1 - 1 Chr. 1 - 168153551 - 168154056 [+] on Build GRCm38 103
GenBankmRNA BF463826.1 - 1 Chr. 1 - 168153534 - 168153948 [+] on Build GRCm38 103
GenBankmRNA AU041317.1 - 1 Chr. 1 - 168153551 - 168153987 [+] on Build GRCm38 103
GenBankmRNA AW487892.1 - 1 Chr. 1 - 168153534 - 168153911 [+] on Build GRCm38 103
GenBankmRNA BM053413.1 - 1 Chr. 1 - 168153540 - 168154060 [+] on Build GRCm38 103
GenBankmRNA AV015754.1 - 1 223 Chr. 1 - 168153551 - 168153886 [-] on Build GRCm38 103
GenBankmRNA BQ174480.1 - 1 Chr. 1 - 168153534 - 168154238 [+] on Build GRCm38 103
GenBankmRNA BG087478.2 - 1 358 Chr. 1 - 168153552 - 168154023 [-] on Build GRCm38 103
GenBankmRNA BE136320.1 - 1 Chr. 1 - 168153546 - 168154025 [+] on Build GRCm38 103
GenBankmRNA BB446070.2 - 1 508 Chr. 1 - 168153527 - 168154173 [-] on Build GRCm38 103
GenBankmRNA BE981671.1 - 1 262 Chr. 1 - 168153547 - 168153927 [-] on Build GRCm38 103
GenBankmRNA BQ831976.1 - 1 Chr. 1 - 168153543 - 168154090 [+] on Build GRCm38 103
GenBankmRNA BE634095.1 - 1 276 Chr. 1 - 168153548 - 168153941 [-] on Build GRCm38 103
GenBankmRNA AW554536.2 - 1 Chr. 1 - 168153551 - 168153945 [+] on Build GRCm38 103
GenBankmRNA DV047611.1 - 335 Chr. - - [-] on Build 103
GenBankmRNA BB387836.1 - 1 225 Chr. 1 - 168153551 - 168153891 [-] on Build GRCm38 103
GenBankmRNA BB313659.1 - 1 206 Chr. 1 - 168153551 - 168153866 [-] on Build GRCm38 103
GenBankmRNA BQ831376.1 - 1 Chr. 1 - 168153543 - 168154101 [+] on Build GRCm38 103
GenBankmRNA CJ259288.1 - 1 337 Chr. 1 - 168153551 - 168154002 [-] on Build GRCm38 103
GenBankmRNA BE691544.1 - 1 Chr. 1 - 168153532 - 168153908 [+] on Build GRCm38 103

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream LIM homeobox transcription factor 1 alpha Lmx1a Lmx1.1,
dr,
dreher,
sst 		-304.8kb Anti-sense Chr. 1 - 167688300 - 167848741 on NCBI Build GRCm38
Downstream microRNA 6348 Mir6348 Gm27412,
mmu-mir-6348 		335.4kb Anti-sense Chr. 1 - 168490643 - 168490762 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100003487.mm.1

Set Membership:

 Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Detect Genomic DNA Mus musculus 1700 Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pbx1

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix ABI


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