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Gene Symbol:
Deptor
Gene Name:
Gene Aliases:
Species:
Mouse
Species Specific ID (Flybase ID):
Assay ID Mm03955142_s1
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Catalog # 4426961
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Assay Details

Gene Symbol: Deptor
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_001037937.3 NP_001033026.1 9 6871 96
NM_145470.3 NP_663445.2 9 7049 96
GenBank mRNA AK014624.1 - 1 651 96
AK171902.1 - 2815 96
AK172487.1 - 1 2225 96
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CR757092.1 - 1 213 Chr. 15 - 55257561 - 55257877 [+] on Build GRCm38 96
GenBankmRNA AW109662.1 - 1 188 Chr. 15 - 55257609 - 55257958 [+] on Build GRCm38 96
GenBankmRNA BQ551013.1 - 1 560 Chr. 15 - 55257211 - 55257842 [+] on Build GRCm38 96
GenBankmRNA BI696090.1 - 161 Chr. - - [-] on Build 96
GenBankmRNA BI557184.1 - 1 202 Chr. 15 - 55257584 - 55258300 [+] on Build GRCm38 96
GenBankmRNA BE134665.1 - 1 257 Chr. 15 - 55257517 - 55258017 [+] on Build GRCm38 96
GenBankmRNA CO430172.1 - 1 500 Chr. 15 - 55257280 - 55258008 [+] on Build GRCm38 96
GenBankmRNA BG862815.1 - 1 353 Chr. 15 - 55257421 - 55258103 [+] on Build GRCm38 96
GenBankmRNA BF235914.1 - 344 Chr. - - [-] on Build 96

Adjacent Gene Details

Gene name Gene Symbol Alias Distance Relative Direction Location Chromsome
Upstream predicted gene 9920 Gm9920 ENSMUSG00000053749 -143.5kb Anti-sense Chr. 15 - 55099917 - 55113582 on NCBI Build GRCm38
Downstream collagen,
type XIV,
alpha 1 		Col14a1 5730412L22Rik,
AW108078 		48.4kb Sense Chr. 15 - 55307706 - 55520803 on NCBI Build GRCm38

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More Information


Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500000392.mm.1

Set Membership:

 Ambion siRNA available Amplicon length between 86 and 100 3' Most Detect Genomic DNA Mus musculus 1700 Both primers and probe map within a single exon

Gene Ontology Categories:

Function(s)

MicroArray Probes:

Affymetrix ABI


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