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          • Home
          • › Search Tool
          • › Search Results
          • › Mm04208182_m1
          See other SOX17 GE Assays ›
          Gene Symbol:
          Sox17
          Gene Name:
          SRY (sex determining region Y)-box 17
          Gene Aliases:
          -
          Chromosome Location:
          Chr.1: 4490928 - 4497388 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm04208182_m1
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
          Your Price
          Online offer:
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Sox17
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001289465.1 NP_001276394.1 2 - 3 1878 76
          NM_001289466.1 NP_001276395.1 2 - 3 1134 76
          NM_011441.5 NP_035571.1 2 - 3 1878 76
          GenBank mRNA AK004781.1 - 2 - 3 939 76
          AK013848.1 - 1 - 2 163 76
          AK076707.1 - 2 - 3 1881 76

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0100001905.mm.1

          Additional Information:

          This assay is in the 5'UTR region of the AK004781.1, NM_001289465.1, NM_001289466.1, NM_011441.5 transcripts.

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 3' Most Mus musculus 1700 Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Sox17

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          angiogenesis
          vasculogenesis
          endoderm formation
          inner cell mass cellular morphogenesis
          heart looping
          cardiogenic plate morphogenesis
          embryonic heart tube morphogenesis
          outflow tract morphogenesis
          negative regulation of Wnt signaling pathway involved in heart development
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          transcription by RNA polymerase II
          spermatogenesis
          gastrulation
          endoderm development
          endodermal cell fate determination
          positive regulation of gene expression
          Wnt signaling pathway
          rostrocaudal neural tube patterning
          signal transduction involved in regulation of gene expression
          negative regulation of Wnt signaling pathway
          negative regulation of cell growth
          protein destabilization
          embryonic heart tube development
          cell migration involved in gastrulation
          regulation of mesodermal cell fate specification
          negative regulation of mesodermal cell fate specification
          mRNA transcription by RNA polymerase II
          regulation of cell differentiation
          positive regulation of cell differentiation
          positive regulation of protein catabolic process
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          regulation of embryonic development
          embryonic organ development
          embryonic foregut morphogenesis
          positive regulation of skeletal muscle tissue development
          stem cell differentiation
          stem cell fate specification
          protein stabilization
          canonical Wnt signaling pathway
          endocardium formation
          cardiac cell fate determination
          endocardial cell differentiation
          common bile duct development
          gall bladder development
          endodermal digestive tract morphogenesis
          renal system development
          regulation of stem cell proliferation
          negative regulation of canonical Wnt signaling pathway
          regulation of stem cell division
          regulation of cardiac cell fate specification
          transcription cis-regulatory region binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          DNA-binding transcription activator activity, RNA polymerase II-specific
          DNA binding
          DNA-binding transcription factor activity
          transcription coactivator activity
          protein binding
          beta-catenin binding
          transcription factor binding
          sequence-specific DNA binding
          protein heterodimerization activity

          MicroArray Probes:

          Affymetrix ABI

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR0100015736.mm.1 TC0100001905.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100015736.mm.1 NM_001289464.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100015736.mm.1 NM_011441.5 Refseq
          Affymetrix Mouse Clariom S Array PSR0100015735.mm.1 TC0100001905.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100015735.mm.1 NM_001289464.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100015735.mm.1 NM_011441.5 Refseq
          Affymetrix Mouse Clariom S Array PSR0100015740.mm.1 TC0100001905.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0100015740.mm.1 NM_001289465.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100015740.mm.1 NM_001289466.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0100015740.mm.1 NM_011441.5 Refseq
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 774026 - -

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          Host server : magellan-search-65cb46898d-nlgdw:80/100.66.128.131:80.
          git-commit: e5493f66f4597fc66e516c8a379ca3b6bed48f5b
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.33.0-2025.07.30-1.0