Name: [Mm04238553_s1] [E330033B04Rik]
Creator: Thermo Fisher Scientific
Keywords: [E330033B04Rik] Assay, [RIKEN cDNA E330033B04 gene] Assay

Assay Details

Gene Symbol: E330033B04Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_030690.1		1	949		114

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	W91686.1	-	1	54		Chr. 15 - 96274046 - 96274380 [-] on Build GRCm38	114
GenBankmRNA	DV051391.1	-		317		Chr. - - [-] on Build	114

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RIKEN cDNA 4833422M21 gene	4833422M21Rik	4933406G12Rik	-13.9kb	Sense	Chr. 15 - 96231870 - 96254684 on NCBI Build GRCm38
Downstream	AT rich interactive domain 2 (ARID, RFX-like)	Arid2	1700124K17Rik, 4432409D24Rik, zipzap/p200	12.2kb	Anti-sense	Chr. 15 - 96287522 - 96405463 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500002137.mm.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Six_ChIP_03_of_03_v2	A_68_P30462615	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462620	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462608	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462599	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462632	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12398011	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462604	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462636	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462644	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462602	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462619	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462606	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462594	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P11927350	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462621	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462629	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462639	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462641	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12076340	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462617	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462622	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12188970	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462609	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462624	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12188968	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462625	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P12076341	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462611	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462638	-	-
Agilent Six_ChIP_03_of_03_v2	A_68_P30462627	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500017126.mm.1	TC1500002137.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500017126.mm.1	NR_030690.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017126.mm.1	NR_030690.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017123.mm.1	TC1500002137.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500017123.mm.1	NR_030690.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017123.mm.1	NR_030690.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017125.mm.1	TC1500002137.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500017125.mm.1	NR_030690.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017125.mm.1	NR_030690.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017128.mm.1	TC1500002137.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500017128.mm.1	NR_030690.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017128.mm.1	NR_030690.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017129.mm.1	TC1500002137.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500017129.mm.1	NR_030690.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017129.mm.1	NR_030690.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017124.mm.1	TC1500002137.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500017124.mm.1	NR_030690.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017124.mm.1	NR_030690.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017127.mm.1	TC1500002137.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500017127.mm.1	NR_030690.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017127.mm.1	NR_030690.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017130.mm.1	TC1500002137.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1500017130.mm.1	NR_030690.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500017130.mm.1	NR_030690.1	Refseq

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Catalog #	4426961
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System Message

Genomic Map