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          • › Mm07299609_m1
          See other TLR9 GE Assays ›
          Gene Symbol:
          Tlr9
          Gene Name:
          toll-like receptor 9
          Gene Aliases:
          -
          Chromosome Location:
          Chr.9: 106222598 - 106226876 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm07299609_m1
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Tlr9
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_031178.2 NP_112455.2 1 - 2 109 62
          GenBank mRNA AB045181.1 - 1 - 2 109 62
          AF314224.1 - 1 - 2 88 62
          AF348140.1 - 1 - 2 42 62

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          More Information


          Additional Information:

          This assay is in the 5'UTR region of the AB045181.1, AF314224.1, AF348140.1, NM_031178.2 transcripts.

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Mus musculus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Tlr9

          Gene Ontology Categories:

          Function(s) Process(es)

          microglial cell activation
          regulation of protein phosphorylation
          toll-like receptor signaling pathway
          response to molecule of bacterial origin
          immune system process
          regulation of dendritic cell cytokine production
          MyD88-dependent toll-like receptor signaling pathway
          inflammatory response
          immune response
          signal transduction
          I-kappaB phosphorylation
          response to virus
          positive regulation of autophagy
          positive regulation of gene expression
          maintenance of gastrointestinal epithelium
          negative regulation of NF-kappaB transcription factor activity
          tumor necrosis factor production
          negative regulation of interleukin-6 production
          negative regulation of interleukin-8 production
          positive regulation of chemokine production
          positive regulation of granulocyte macrophage colony-stimulating factor production
          positive regulation of interferon-beta production
          positive regulation of interleukin-10 production
          positive regulation of interleukin-12 production
          positive regulation of interleukin-18 production
          positive regulation of interleukin-6 production
          positive regulation of interleukin-8 production
          positive regulation of tumor necrosis factor production
          negative regulation of toll-like receptor signaling pathway
          positive regulation of toll-like receptor signaling pathway
          toll-like receptor 9 signaling pathway
          positive regulation of NF-kappaB import into nucleus
          positive regulation of I-kappaB kinase/NF-kappaB signaling
          positive regulation of JUN kinase activity
          positive regulation of interferon-gamma biosynthetic process
          innate immune response
          positive regulation of interferon-alpha biosynthetic process
          positive regulation of interferon-beta biosynthetic process
          positive regulation of transcription from RNA polymerase II promoter
          regulation of cytokine secretion
          regulation of inflammatory response
          positive regulation of inflammatory response
          defense response to Gram-negative bacterium
          regulation of B cell activation
          positive regulation of NF-kappaB transcription factor activity
          defense response to virus
          positive regulation of nitric-oxide synthase biosynthetic process
          negative regulation of calcium-transporting ATPase activity
          transmembrane signaling receptor activity
          interleukin-1 receptor binding
          protein binding
          siRNA binding
          unmethylated CpG binding

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P26801964 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P26801967 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P26801965 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P26801966 - -
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P432563 AF314224.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P432563 NM_031178.2 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P432563 AB045181.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P432563 AF314224.1 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P432563 NM_031178.2 mouse_transcriptome
          Agilent Whole Mouse Genome Microarray 4x44K v2 A_51_P432563 AB045181.1 mouse_transcriptome
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 87241 - -
          Agilent SurePrint G3 Mouse CGH Microarray 1x1M 334568 AK016413.1 genbank_mrna_mouse
          Agilent Mouse Genome CGH Microarray 44K G4426B A_53_P178290 - -
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P432563 AF314224.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P432563 NM_031178.2 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P432563 AB045181.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P432563 AF314224.1 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P432563 NM_031178.2 mouse_transcriptome
          SurePrint G3 Mouse Gene Expression Microarray G4852A A_51_P432563 AB045181.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P432563 AF314224.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P432563 NM_031178.2 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P432563 AB045181.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P432563 AF314224.1 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P432563 NM_031178.2 mouse_transcriptome
          Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " A_51_P432563 AB045181.1 mouse_transcriptome
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801942 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801929 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801952 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801957 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801923 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801941 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801958 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801934 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801930 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801922 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801946 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801955 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801932 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801959 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801920 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801961 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801943 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801935 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801940 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801925 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801963 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801927 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801917 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801936 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801938 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801953 - -
          Agilent Mouse Promoter ChIP-on-Chip A) A_68_P26801949 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_67_P02022459 - -
          Agilent Mouse Genome CGH Microarray 244A (G4415A) A_53_P178290 - -
          Whole Mouse Genome G4122A A_51_P432563 AF314224.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P432563 NM_031178.2 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P432563 AB045181.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P432563 AF314224.1 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P432563 NM_031178.2 mouse_transcriptome
          Whole Mouse Genome G4122A A_51_P432563 AB045181.1 mouse_transcriptome
          Agilent Mouse Developmental Microarray 44K G2519A Option 002 A_66_P105230 - -
          Agilent Mouse Genome CGH Microarray 105A (G4416A) A_53_P178290 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P07786629 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P07786648 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P07786657 - -
          Agilent Mouse Proximal Promoter ChIP-on-Chip A) A_68_P07786622 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P26801967 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P26801965 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P26801966 - -
          Agilent Mouse CpG Island ChIP-on-Chip Microarray 2x105K A_68_P26801964 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801938 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801936 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801941 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801928 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801943 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801980 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801973 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801916 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801908 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801934 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801940 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801957 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26802033 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801965 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801914 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801971 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801958 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801946 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801978 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801976 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801961 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801969 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801955 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26802030 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801953 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26802028 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801929 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801932 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801949 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801966 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26802029 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801917 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801963 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801915 - -
          Agilent Mouse Whole Genome ChIP-on-Chip A_68_P26801952 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801953 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801955 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801922 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07499033 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07786654 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801932 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07580441 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801908 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801941 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801963 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801915 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07757528 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801943 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801966 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07648210 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801920 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07786619 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07786644 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07786675 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801934 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801976 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P08025180 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801942 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801927 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801916 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801958 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07601126 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801914 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07542236 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801936 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07786634 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801921 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801978 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801923 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801928 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801940 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801930 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07499034 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801917 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801961 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P07786660 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801980 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801957 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801951 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P08034150 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801965 - -
          Agilent Six_ChIP_02_of_03_v2 A_68_P26801912 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Gene 1.0 ST Array 10588480 - -
          Affymetrix Mouse Gene 1.0 ST Array 10588481 - -
          Affymetrix HT MG-430 PM Array Plate 1422083_PM_at - -
          Affymetrix Mouse Gene 1.1 ST Array 10588479 - -
          Mouse Genome 430 2.0 Array 1422083_PM_at - -
          Mouse Genome 430 2.0 Array 1422083_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 81897_at - -
          Affymetrix GeneChip Mouse Genome 430 2.0 Array 81897_PM_at - -
          Affymetrix Mouse Clariom S Array PSR0900010444.mm.1 NM_031178.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0900010444.mm.1 NM_031178.2 Refseq
          Affymetrix Mouse Clariom S Array PSR0900010444.mm.1 TC0900001339.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0900010445.mm.1 NM_031178.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0900010445.mm.1 NM_031178.2 Refseq
          Affymetrix Mouse Clariom S Array PSR0900010445.mm.1 TC0900001339.mm.1 MTA TC
          Affymetrix Mouse Clariom S Array PSR0900010442.mm.1 NM_031178.2.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0900010442.mm.1 NM_031178.2 Refseq
          Affymetrix Mouse Clariom S Array PSR0900010442.mm.1 TC0900001339.mm.1 MTA TC
          Mouse Expression Set 430 1422083_PM_at - -
          Mouse Expression Set 430 1422083_at - -
          Mouse Genome 430A 2.0 Array 1422083_at - -
          Mouse Genome 430A 2.0 Array 1422083_PM_at - -
          Affymetrix HT Mouse Genome 430A Array 1422083_at - -
          Affymetrix HT Mouse Genome 430A Array 1422083_PM_at - -
          Array Name Probe IDs Targets Target Type
          MouseWG-6 v2 Expression BeadChip 670706 - -
          Illumina mouse-6 v1.0 expression beadchip 670093 - -
          Illumina mouse-6 v1.0 expression beadchip 670706 - -
          Illumina mouseRef-8 v1.0 expression beadchip 0000670093 - -
          Illumina mouseRef-8 v1.0 expression beadchip 0000670706 - -
          Illumina mouseRef-8 v1.1 expression beadchip ILMN_2454579 - -
          Illumina mouseRef-8 v1.1 expression beadchip ILMN_2449109 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_2449109 - -
          Illumina mouse-6 v1.1 expression beadchip ILMN_2454579 - -
          mouse-6 v1.1 (Illumina) scl0003574.1_1-S - -
          mouse-6 v1.1 (Illumina) scl36515.2.1_2-S - -
          Illumina Sentrix mouse-6.v1 bead array 670093 - -
          Illumina Sentrix mouse-6.v1 bead array 670706 - -
          Illumina Sentrix MouseRef-8 Expression BeadChip scl0003574.1_1-S - -
          Illumina Sentrix MouseRef-8 Expression BeadChip scl36515.2.1_2-S - -
          Illumina Sentrix Mouse-6 Expression BeadChip (2) 670706 - -
          Illumina Sentrix Mouse-6 Expression BeadChip (2) 670093 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_2454579 - -
          Illumina MouseWG-6 v2.0 expression beadchip ILMN_2849322 - -

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