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          • › Rn00560743_g1
          See other APOC3 GE Assays ›
          Gene Symbol:
          Apoc3
          Gene Name:
          apolipoprotein C-III
          Gene Aliases:
          ApoC-III, apo-CIII
          Chromosome Location:
          Chr.8: 50529318 - 50531533 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00560743_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Apoc3
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001271053.1 NP_001257982.1 2 - 3 180 85
          NM_012501.2 NP_036633.2 2 - 3 137 85
          XM_008766144.1 XP_008764366.1 2 - 3 172 85
          XM_008766146.1 XP_008764368.1 2 - 3 150 85
          GenBank mRNA AW917416.1 - 2 - 3 89 85
          FQ209522.1 - 2 - 3 104 85
          FQ209891.1 - 2 - 3 106 85
          FQ210075.1 - 2 - 3 137 85
          FQ210397.1 - 2 - 3 104 85
          FQ210428.1 - 2 - 3 108 85
          FQ210554.1 - 2 - 3 105 85
          FQ210884.1 - 2 - 3 103 85
          FQ211165.1 - 2 - 3 104 85
          FQ211318.1 - 2 - 3 106 85
          FQ211343.1 - 2 - 3 106 85
          FQ211392.1 - 2 - 3 108 85
          FQ211416.1 - 2 - 3 109 85
          FQ211454.1 - 2 - 3 108 85
          FQ218088.1 - 2 - 3 136 85
          FQ218207.1 - 2 - 3 136 85
          FQ218211.1 - 2 - 3 180 85
          FQ218286.1 - 2 - 3 107 85
          FQ219230.1 - 2 - 3 104 85

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0800002454.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Apoc3

          Gene Ontology Categories:

          Function(s) Process(es)

          triglyceride metabolic process
          triglyceride mobilization
          lipid transport
          inflammatory response
          G protein-coupled receptor signaling pathway
          response to nutrient
          cholesterol metabolic process
          response to xenobiotic stimulus
          negative regulation of triglyceride catabolic process
          negative regulation of very-low-density lipoprotein particle remodeling
          negative regulation of very-low-density lipoprotein particle clearance
          negative regulation of high-density lipoprotein particle clearance
          negative regulation of low-density lipoprotein particle clearance
          triglyceride catabolic process
          regulation of Cdc42 protein signal transduction
          cholesterol efflux
          phospholipid efflux
          high-density lipoprotein particle remodeling
          chylomicron remnant clearance
          lipoprotein metabolic process
          cholesterol homeostasis
          lipoprotein transport
          response to peptide hormone
          negative regulation of fatty acid biosynthetic process
          negative regulation of lipid metabolic process
          negative regulation of receptor-mediated endocytosis
          negative regulation of lipid catabolic process
          negative regulation of lipoprotein lipase activity
          negative regulation of cholesterol import
          triglyceride homeostasis
          cellular response to glucose stimulus
          lipid transporter activity
          phospholipid binding
          enzyme regulator activity
          lipase inhibitor activity
          high-density lipoprotein particle receptor binding

          MicroArray Probes:

          Agilent Affymetrix ABI

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P327799 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P327799 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P327799 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P327799 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P11435 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P327799 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10940680 - -
          Affymetrix Rat Gene 1.1 ST Array 10940680 - -
          Rat Genome 230 2.0 Array 1370009_at - -
          Rat Genome 230 2.0 Array 1370009_PM_at - -
          Affymetrix HT Rat Focus Array 1370009_PM_at - -
          Affymetrix HT Rat Focus Array 1370009_at - -
          Affymetrix Rat Clariom S Assay PSR0800019791.rn.1 TC0800002454.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0800019781.rn.1 TC0800002454.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0800019782.rn.1 TC0800002454.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0800019787.rn.1 TC0800002454.rn.1 RTA TC
          Rat Expression Set 230 1370009_at - -
          Rat Expression Set 230 1370009_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10940680 - -
          Rat Genome U34 Set J02596cds_at - -
          Rat Genome U34 Set J02596cds_g_at - -
          Rat Genome U34 Set rc_AI169758_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21815446 - -

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