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- Gene Symbol:
-
Smo - Gene Name:
- smoothened, frizzled class receptor
- Gene Aliases:
- Smoh
- Chromosome Location:
- Chr.4: 57019941 - 57041779 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Smo | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_012807.1 | NP_036939.1 | 1 - 2 | 342 | 96 | |
| GenBank mRNA | U84402.1 | - | 1 - 2 | 342 | 96 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0400000527.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
G-protein coupled receptor
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription by RNA polymerase II
ossification
vasculogenesis
osteoblast differentiation
in utero embryonic development
cell fate specification
neural crest cell migration
heart looping
positive regulation of neuroblast proliferation
positive regulation of mesenchymal cell proliferation
heart morphogenesis
determination of left/right asymmetry in lateral mesoderm
type B pancreatic cell development
G protein-coupled receptor signaling pathway
smoothened signaling pathway
positive regulation of hh target transcription factor activity
spermatogenesis
determination of left/right symmetry
ventral midline determination
pattern specification process
central nervous system development
midgut development
positive regulation of cell population proliferation
response to wounding
anterior/posterior pattern specification
dorsal/ventral pattern formation
response to organic substance
regulation of gene expression
positive regulation of gene expression
negative regulation of gene expression
facial nerve development
cerebellar cortex morphogenesis
thalamus development
dorsal/ventral neural tube patterning
smoothened signaling pathway involved in ventral spinal cord patterning
smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation
central nervous system neuron differentiation
cerebral cortex development
negative regulation of epithelial cell differentiation
hair follicle morphogenesis
neuron projection regeneration
osteoblast proliferation
protein localization to nucleus
multicellular organism growth
non-canonical Wnt signaling pathway
positive regulation of protein import into nucleus
odontogenesis of dentin-containing tooth
negative regulation of apoptotic process
negative regulation of DNA binding
positive regulation of smoothened signaling pathway
positive regulation of transcription by RNA polymerase II
astrocyte activation
cell development
digestive tract development
embryonic organ development
developmental growth
skeletal muscle fiber development
axon extension involved in axon guidance
forebrain morphogenesis
homeostasis of number of cells within a tissue
positive regulation of epithelial cell proliferation
protein stabilization
myoblast migration
negative regulation of hair follicle development
canonical Wnt signaling pathway
contact inhibition
atrial septum morphogenesis
mammary gland epithelial cell differentiation
epithelial-mesenchymal cell signaling
somite development
pancreas morphogenesis
left/right axis specification
cellular response to cholesterol
renal system development
mesenchymal to epithelial transition involved in metanephric renal vesicle formation
positive regulation of branching involved in ureteric bud morphogenesis
regulation of stem cell population maintenance
regulation of heart morphogenesis
molecular_function
transmembrane signaling receptor activity
G protein-coupled receptor activity
patched binding
Wnt-protein binding
Wnt-activated receptor activity
negative regulation of transcription by RNA polymerase II
ossification
vasculogenesis
osteoblast differentiation
in utero embryonic development
cell fate specification
neural crest cell migration
heart looping
positive regulation of neuroblast proliferation
positive regulation of mesenchymal cell proliferation
heart morphogenesis
determination of left/right asymmetry in lateral mesoderm
type B pancreatic cell development
G protein-coupled receptor signaling pathway
smoothened signaling pathway
positive regulation of hh target transcription factor activity
spermatogenesis
determination of left/right symmetry
ventral midline determination
pattern specification process
central nervous system development
midgut development
positive regulation of cell population proliferation
response to wounding
anterior/posterior pattern specification
dorsal/ventral pattern formation
response to organic substance
regulation of gene expression
positive regulation of gene expression
negative regulation of gene expression
facial nerve development
cerebellar cortex morphogenesis
thalamus development
dorsal/ventral neural tube patterning
smoothened signaling pathway involved in ventral spinal cord patterning
smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation
central nervous system neuron differentiation
cerebral cortex development
negative regulation of epithelial cell differentiation
hair follicle morphogenesis
neuron projection regeneration
osteoblast proliferation
protein localization to nucleus
multicellular organism growth
non-canonical Wnt signaling pathway
positive regulation of protein import into nucleus
odontogenesis of dentin-containing tooth
negative regulation of apoptotic process
negative regulation of DNA binding
positive regulation of smoothened signaling pathway
positive regulation of transcription by RNA polymerase II
astrocyte activation
cell development
digestive tract development
embryonic organ development
developmental growth
skeletal muscle fiber development
axon extension involved in axon guidance
forebrain morphogenesis
homeostasis of number of cells within a tissue
positive regulation of epithelial cell proliferation
protein stabilization
myoblast migration
negative regulation of hair follicle development
canonical Wnt signaling pathway
contact inhibition
atrial septum morphogenesis
mammary gland epithelial cell differentiation
epithelial-mesenchymal cell signaling
somite development
pancreas morphogenesis
left/right axis specification
cellular response to cholesterol
renal system development
mesenchymal to epithelial transition involved in metanephric renal vesicle formation
positive regulation of branching involved in ureteric bud morphogenesis
regulation of stem cell population maintenance
regulation of heart morphogenesis
molecular_function
transmembrane signaling receptor activity
G protein-coupled receptor activity
patched binding
Wnt-protein binding
Wnt-activated receptor activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P077367 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 948127 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 633945 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 779034 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 689596 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 239943 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 235416 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 643689 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 904525 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 685030 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 217872 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 820530 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 614421 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 916761 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 439668 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 665424 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 2678 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 200659 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 147502 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 118914 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P077367 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P077367 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P077367 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P15444 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 89514 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 76044 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10854218 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854219 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854215 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854214 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854210 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854213 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854220 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854209 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854216 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854212 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854211 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854217 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10854208 | - | - |
| Rat Genome 230 2.0 Array | 1370143_at | - | - |
| Rat Genome 230 2.0 Array | 1370143_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1389475_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1389475_at | - | - |
| Affymetrix HT Rat Focus Array | 1389475_at | - | - |
| Affymetrix HT Rat Focus Array | 1370143_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1389475_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1370143_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0400003781.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003786.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003778.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003780.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003784.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003777.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003773.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003779.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003785.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003787.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003774.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003776.rn.1 | TC0400000527.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0400003782.rn.1 | TC0400000527.rn.1 | RTA TC |
| Rat Expression Set 230 | 1389475_at | - | - |
| Rat Expression Set 230 | 1370143_PM_at | - | - |
| Rat Expression Set 230 | 1389475_PM_at | - | - |
| Rat Expression Set 230 | 1370143_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10854208 | - | - |
| Rat Genome U34 Set | U84402_at | - | - |
| Rat Genome U34 Set | rc_AI071556_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21262489 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1369634 | - | - |
| RatRef-12 Expression BeadChip | ILMN_57546 | - | - |
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