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          • Home
          • › Search Tool
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          • › Rn00564052_m1
          See other CTSH GE Assays ›
          Gene Symbol:
          Ctsh
          Gene Name:
          cathepsin H
          Gene Aliases:
          -
          Chromosome Location:
          Chr.8: 97439153 - 97458293 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00564052_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ctsh
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_012939.1 NP_037071.1 7 - 8 546 83
          XM_008766440.1 XP_008764662.1 7 - 8 597 83
          GenBank mRNA BC085352.1 - 7 - 8 561 83
          FQ210730.1 - 7 - 8 556 83
          FQ213183.1 - 7 - 8 556 83
          FQ219177.1 - 7 - 8 83
          FQ219285.1 - 7 - 8 556 83
          FQ219548.1 - 7 - 8 556 83
          FQ219611.1 - 7 - 8 574 83
          FQ220588.1 - 4 - 5 325 83
          FQ223707.1 - 7 - 8 552 83
          FQ228686.1 - 7 - 8 616 83
          FQ228906.1 - 7 - 8 563 83
          FQ228938.1 - 7 - 8 553 83
          M38135.1 - 7 - 8 540 83
          Y00708.1 - 7 - 8 546 83

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0800001277.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ctsh

          Gene Ontology Categories:

          Function(s) Process(es)

          metanephros development
          T cell mediated cytotoxicity
          adaptive immune response
          immune response-regulating signaling pathway
          proteolysis
          apoptotic process
          activation of cysteine-type endopeptidase activity involved in apoptotic process
          spermatogenesis
          positive regulation of cell population proliferation
          positive regulation of gene expression
          positive regulation of epithelial cell migration
          neuropeptide catabolic process
          bradykinin catabolic process
          positive regulation of peptidase activity
          positive regulation of cell migration
          zymogen activation
          protein destabilization
          response to retinoic acid
          membrane protein proteolysis
          negative regulation of apoptotic process
          surfactant homeostasis
          positive regulation of angiogenesis
          dichotomous subdivision of terminal units involved in lung branching
          ERK1 and ERK2 cascade
          cellular response to thyroid hormone stimulus
          positive regulation of apoptotic signaling pathway
          endopeptidase activity
          aminopeptidase activity
          cysteine-type endopeptidase activity
          serine-type endopeptidase activity
          peptidase activity
          cysteine-type peptidase activity
          cysteine-type endopeptidase activator activity involved in apoptotic process
          peptidase activator activity involved in apoptotic process
          HLA-A specific activating MHC class I receptor activity
          kininogen binding
          protein self-association
          protein-containing complex binding
          thyroid hormone binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P552849 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 277671 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 560802 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 458763 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 583177 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 666014 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 598076 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 395868 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 755875 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 559204 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 463899 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 756403 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 145187 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 316738 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 138159 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 44605 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 103844 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P552849 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P552849 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P552849 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P552849 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700783730 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 702147645 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 97105 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 80885 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 11018 - -
          Agilent Rat cDNA Microarray (G4105A) 700783730 - -
          Agilent Rat cDNA Microarray (G4105A) 702147645 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10912172 - -
          Affymetrix Rat Gene 1.0 ST Array 10912164 - -
          Affymetrix Rat Gene 1.0 ST Array 10912166 - -
          Affymetrix Rat Gene 1.0 ST Array 10912165 - -
          Affymetrix Rat Gene 1.0 ST Array 10912169 - -
          Affymetrix Rat Gene 1.0 ST Array 10912171 - -
          Affymetrix Rat Gene 1.0 ST Array 10912163 - -
          Affymetrix Rat Gene 1.0 ST Array 10912167 - -
          Affymetrix Rat Gene 1.0 ST Array 10912162 - -
          Affymetrix Rat Gene 1.0 ST Array 10912168 - -
          Affymetrix Rat Gene 1.0 ST Array 10912170 - -
          Affymetrix Rat Gene 1.0 ST Array 10912173 - -
          Affymetrix Rat Gene 1.1 ST Array 10912161 - -
          Rat Genome 230 2.0 Array 1386899_PM_at - -
          Rat Genome 230 2.0 Array 1386899_at - -
          Affymetrix HT Rat Focus Array 1386899_at - -
          Affymetrix HT Rat Focus Array 1386899_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0800009316.rn.1 TC0800001277.rn.1 RTA TC
          Rat Expression Set 230 1386899_at - -
          Rat Expression Set 230 1386899_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10912161 - -
          Rat Genome U34 Set M38135_at - -
          Rat Genome U34 Set rc_AI009415_f_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21861231 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1367864 - -
          RatRef-12 Expression BeadChip ILMN_59666 - -

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          Host server : magellan-search-6659c69d8f-ztd5s:80/100.66.134.6:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0