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Gene Symbol:: Shox2
Gene Name:: short stature homeobox 2
Gene Aliases:: -
Chromosome Location:: Chr.2: 164118175 - 164126783 on Build Rnor_6.0
Species:: Rat
Species Specific ID (Flybase ID):: -

Assay ID

Rn00564672_m1

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Catalog #	4331182
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Genomic Map
Assay Details
More Information

Assay Details

Gene Symbol: Shox2

Interrogated Sequence

Translated Protein

Exon Boundary

Assay Location

IMAGE Clone ID

Amplicon Length

RefSeq

NM_013028.1

NP_037160.1

2 - 3

287

GenBank mRNA

AJ002258.1

2 - 3

308

AJ002259.1

2 - 3

287

AJ002260.1

1 - 2

260

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200003829.rn.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

Recommended Assay

Rattus norvegicus

1700

Inventoried

Probe spans exons

Array Name

Probe IDs

Targets

Target Type

Agilent Whole Rat Genome Microarray 4x44K v2

A_44_P418245

Agilent Whole Rat Genome Microarray 4x44K v2

A_44_P412265

Agilent SurePrint G3 Rat CGH Microarray 1x1M

727283

Agilent SurePrint G3 Rat CGH Microarray 1x1M

114839

Agilent SurePrint G3 Rat CGH Microarray 1x1M

62275

Agilent SurePrint G3 Rat CGH Microarray 1x1M

630844

Agilent SurePrint G3 Rat CGH Microarray 1x1M

52931

Agilent SurePrint G3 Rat CGH Microarray 1x1M

716230

Agilent SurePrint G3 Rat CGH Microarray 1x1M

739058

Agilent SurePrint G3 Rat CGH Microarray 4x180K

162860

Agilent Whole Rat Genome Microarray 4x44K v3

A_44_P412265

Agilent Whole Rat Genome Microarray 4x44K v3

A_44_P418245

Agilent Whole Rat Genome Microarray 4x44K v3

A_44_P412265

Agilent Whole Rat Genome Microarray 4x44K v3

A_44_P418245

Agilent SurePrint G3 Rat GE 8x60K Microarray

A_44_P412265

Agilent SurePrint G3 Rat GE 8x60K Microarray

A_44_P418245

SurePrint G3 Rat Gene Expression Microarray G4131A

A_44_P418245

SurePrint G3 Rat Gene Expression Microarray G4131A

A_44_P412265

Agilent Rat Genome CGH Microarray 105A (G4436A)

53145

Array Name

Probe IDs

Targets

Target Type

Affymetrix Rat Gene 1.0 ST Array

10823541

Affymetrix Rat Gene 1.0 ST Array

10823540

Affymetrix Rat Gene 1.0 ST Array

10823546

Affymetrix Rat Gene 1.0 ST Array

10823539

Affymetrix Rat Gene 1.0 ST Array

10823543

Affymetrix Rat Gene 1.0 ST Array

10823544

Affymetrix Rat Gene 1.0 ST Array

10823542

Affymetrix Rat Gene 1.1 ST Array

10823538

Rat Genome 230 2.0 Array

1368825_at

Rat Genome 230 2.0 Array

1375389_at

Rat Genome 230 2.0 Array

1387349_at

Rat Genome 230 2.0 Array

1375389_PM_at

Rat Genome 230 2.0 Array

1368825_PM_at

Rat Genome 230 2.0 Array

1387349_PM_at

Affymetrix HT Rat Focus Array

1375389_PM_at

Affymetrix HT Rat Focus Array

1368825_PM_at

Affymetrix HT Rat Focus Array

1387349_at

Affymetrix HT Rat Focus Array

1375389_at

Affymetrix HT Rat Focus Array

1387349_PM_at

Affymetrix HT Rat Focus Array

1368825_at

Affymetrix Rat Clariom S Assay

PSR0200025675.rn.1

TC0200003829.rn.1

RTA TC

Affymetrix Rat Clariom S Assay

PSR0200025674.rn.1

TC0200003829.rn.1

RTA TC

Affymetrix Rat Clariom S Assay

PSR0200025676.rn.1

TC0200003829.rn.1

RTA TC

Rat Expression Set 230

1368825_at

Rat Expression Set 230

1375389_PM_at

Rat Expression Set 230

1368825_PM_at

Rat Expression Set 230

1387349_PM_at

Rat Expression Set 230

1375389_at

Rat Expression Set 230

1387349_at

Affymetrix Rat Gene 1.0 ST Array

10823538

Rat Genome U34 Set

AJ002259_at

Rat Genome U34 Set

AJ002259_g_at

Rat Genome U34 Set

rc_AI103639_at

System Message

Genomic Map

Assay Details

More Information

Updated Mapping Information

Set Membership:

Matching Ambion siRNAs:

Gene Ontology Categories:

MicroArray Probes:

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Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360521	-	-
RatRef-12 Expression BeadChip	ILMN_59659	-	-