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          • › Search Tool
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          • › Rn00565555_m1
          See other SMAD1 GE Assays ›
          Gene Symbol:
          Smad1
          Gene Name:
          SMAD family member 1
          Gene Aliases:
          Madh1
          Chromosome Location:
          Chr.19: 32182914 - 32248694 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00565555_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Smad1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_013130.2 NP_037262.2 3 - 4 989 79
          XM_006255394.1 XP_006255456.1 3 - 4 1090 79
          XM_006255395.2 XP_006255457.1 3 - 4 1749 79
          XM_006255396.2 XP_006255458.1 3 - 4 980 79
          XM_006255397.1 XP_006255459.1 3 - 4 1090 79
          GenBank mRNA AF067727.1 - 2 - 3 670 79
          BC061757.1 - 3 - 4 989 79
          U66478.1 - 3 - 4 970 79

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1900000422.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Smad1

          Gene Ontology Categories:

          Function(s) Process(es)

          MAPK cascade
          ureteric bud development
          mesodermal cell fate commitment
          kidney development
          osteoblast fate commitment
          transcription, DNA-templated
          regulation of transcription by RNA polymerase II
          protein phosphorylation
          inflammatory response
          transforming growth factor beta receptor signaling pathway
          SMAD protein complex assembly
          gamete generation
          negative regulation of cell population proliferation
          response to xenobiotic stimulus
          embryonic pattern specification
          response to organonitrogen compound
          positive regulation of gene expression
          negative regulation of muscle cell apoptotic process
          BMP signaling pathway
          midbrain development
          hindbrain development
          wound healing
          homeostatic process
          positive regulation of cell differentiation
          positive regulation of osteoblast differentiation
          positive regulation of transcription by RNA polymerase II
          positive regulation of dendrite morphogenesis
          cartilage development
          cardiac muscle cell proliferation
          bone development
          positive regulation of cartilage development
          cellular response to organic cyclic compound
          cellular response to BMP stimulus
          positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          RNA polymerase II core promoter sequence-specific DNA binding
          DNA-binding transcription factor activity
          protein binding
          protein kinase binding
          identical protein binding
          protein homodimerization activity
          metal ion binding
          protein heterodimerization activity
          co-SMAD binding
          I-SMAD binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P668072 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 802793 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 83167 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 243219 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 739456 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 666241 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 27481 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 229737 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 460083 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 480915 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 89655 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 277859 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 466590 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 838466 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 471897 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 853818 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 724202 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 86759 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 289669 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 883695 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 832342 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 293722 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 460096 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 555765 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 38630 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 539756 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 336087 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 180396 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 965698 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 368332 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 381418 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 800249 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 798973 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 891918 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 38937 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 772838 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 422997 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 69867 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 475627 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 671339 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 613218 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 734233 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 512244 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 506780 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 125775 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 866472 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 495265 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 59527 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 7961 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 169062 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 15581 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 159152 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 98456 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 17800 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 54030 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P668072 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P668072 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P668072 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P419162 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P668072 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 25613 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 91796 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 3314 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10806984 - -
          Affymetrix Rat Gene 1.0 ST Array 10806988 - -
          Affymetrix Rat Gene 1.0 ST Array 10806989 - -
          Affymetrix Rat Gene 1.0 ST Array 10806987 - -
          Affymetrix Rat Gene 1.0 ST Array 10806982 - -
          Affymetrix Rat Gene 1.0 ST Array 10806985 - -
          Affymetrix Rat Gene 1.0 ST Array 10806983 - -
          Affymetrix Rat Gene 1.0 ST Array 10806990 - -
          Affymetrix Rat Gene 1.0 ST Array 10806992 - -
          Affymetrix Rat Gene 1.0 ST Array 10806991 - -
          Affymetrix Rat Gene 1.1 ST Array 10806981 - -
          Rat Genome 230 2.0 Array 1389373_PM_at - -
          Rat Genome 230 2.0 Array 1369174_PM_at - -
          Rat Genome 230 2.0 Array 1369174_at - -
          Rat Genome 230 2.0 Array 1389373_at - -
          Affymetrix HT Rat Focus Array 1389373_PM_at - -
          Affymetrix HT Rat Focus Array 1389373_at - -
          Affymetrix HT Rat Focus Array 1369174_PM_at - -
          Affymetrix HT Rat Focus Array 1369174_at - -
          Affymetrix Rat Clariom S Assay PSR1900003343.rn.1 TC1900000422.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1900003348.rn.1 TC1900000422.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1900003344.rn.1 TC1900000422.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1900003345.rn.1 TC1900000422.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1900003349.rn.1 TC1900000422.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1900003341.rn.1 TC1900000422.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1900003350.rn.1 TC1900000422.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1900003351.rn.1 TC1900000422.rn.1 RTA TC
          Rat Expression Set 230 1369174_at - -
          Rat Expression Set 230 1389373_at - -
          Rat Expression Set 230 1389373_PM_at - -
          Rat Expression Set 230 1369174_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10806981 - -
          Rat Genome U34 Set AF067727_s_at - -
          Rat Genome U34 Set U66478_at - -
          Rat Genome U34 Set rc_AI010195_at - -
          Rat Genome U34 Set U66478_at - -
          Rat Genome U34 Set AF067727_s_at - -
          Rat Genome U34 Set AF067727_s_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22111415 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1372728 - -
          RatRef-12 Expression BeadChip ILMN_49228 - -

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