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          • › Search Tool
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          • › Rn00565736_m1
          See other CLCN1 GE Assays ›
          Gene Symbol:
          Clcn1
          Gene Name:
          chloride channel, voltage-sensitive 1
          Gene Aliases:
          SMCC
          Chromosome Location:
          Chr.4: 71674467 - 71704159 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00565736_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Clcn1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_013147.1 NP_037279.1 20 - 21 2510 133
          XM_008762873.1 XP_008761095.1 19 - 20 133
          GenBank mRNA AY112736.1 - 19 - 20 2259 133
          AY112737.1 - 21 - 22 2420 133
          AY112738.1 - 20 - 21 2341 133
          AY112739.1 - 19 - 20 2212 133
          AY112740.1 - 20 - 21 2338 133
          X62894.1 - 20 - 21 2510 133

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0400000754.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Clcn1

          Gene Ontology Categories:

          Function(s) Process(es)

          chloride transport
          neuronal action potential propagation
          ion transmembrane transport
          regulation of ion transmembrane transport
          regulation of anion transport
          chloride transmembrane transport
          voltage-gated chloride channel activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P11736 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P018102 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 419938 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 615401 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 469698 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 158549 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 919385 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 797836 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 63238 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 579195 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 505341 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 92791 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 904357 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 866730 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 281643 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 721521 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 576464 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 411123 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 770321 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 497221 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 198052 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 782864 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 899316 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 15686 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 259255 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 126059 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 27901 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 174024 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P018102 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P11736 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P018102 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P11736 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P11736 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P018102 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P529311 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 90478 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 2808 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10855038 - -
          Affymetrix Rat Gene 1.0 ST Array 10855040 - -
          Affymetrix Rat Gene 1.0 ST Array 10855058 - -
          Affymetrix Rat Gene 1.0 ST Array 10855054 - -
          Affymetrix Rat Gene 1.0 ST Array 10855042 - -
          Affymetrix Rat Gene 1.0 ST Array 10855060 - -
          Affymetrix Rat Gene 1.0 ST Array 10855052 - -
          Affymetrix Rat Gene 1.0 ST Array 10855053 - -
          Affymetrix Rat Gene 1.0 ST Array 10855047 - -
          Affymetrix Rat Gene 1.0 ST Array 10855044 - -
          Affymetrix Rat Gene 1.0 ST Array 10855049 - -
          Affymetrix Rat Gene 1.0 ST Array 10855059 - -
          Affymetrix Rat Gene 1.0 ST Array 10855036 - -
          Affymetrix Rat Gene 1.0 ST Array 10855046 - -
          Affymetrix Rat Gene 1.0 ST Array 10855061 - -
          Affymetrix Rat Gene 1.0 ST Array 10855041 - -
          Affymetrix Rat Gene 1.0 ST Array 10855039 - -
          Affymetrix Rat Gene 1.0 ST Array 10855037 - -
          Affymetrix Rat Gene 1.0 ST Array 10855057 - -
          Affymetrix Rat Gene 1.0 ST Array 10855043 - -
          Affymetrix Rat Gene 1.0 ST Array 10855048 - -
          Affymetrix Rat Gene 1.0 ST Array 10855045 - -
          Affymetrix Rat Gene 1.0 ST Array 10855050 - -
          Affymetrix Rat Gene 1.0 ST Array 10855055 - -
          Affymetrix Rat Gene 1.0 ST Array 10855056 - -
          Affymetrix Rat Gene 1.1 ST Array 10855035 - -
          Rat Genome 230 2.0 Array 1387719_at - -
          Rat Genome 230 2.0 Array 1387719_PM_at - -
          Affymetrix HT Rat Focus Array 1387719_at - -
          Affymetrix HT Rat Focus Array 1387719_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0400005567.rn.1 TC0400000754.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400005568.rn.1 TC0400000754.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400005569.rn.1 TC0400000754.rn.1 RTA TC
          Rat Expression Set 230 1387719_at - -
          Rat Expression Set 230 1387719_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10855035 - -
          Rat Genome U34 Set X62894_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21142472 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1362416 - -
          RatRef-12 Expression BeadChip ILMN_68485 - -

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          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0