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- Gene Symbol:
-
Itgb1 - Gene Name:
- integrin, beta 1
- Gene Aliases:
- -
- Chromosome Location:
- Chr.19: 61677512 - 61725537 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Itgb1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_017022.2 | NP_058718.2 | 6 - 7 | 957 | 81 | |
| XM_006255824.1 | XP_006255886.1 | 6 - 7 | 987 | 81 | ||
| GenBank mRNA | BC131845.1 | - | 6 - 7 | 957 | 8366766 | 81 |
| U12309.1 | - | 6 - 7 | 831 | 81 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1900000902.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
3' Most
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
Rat Inflammation
1700
Inventoried
Rat_Inflammation
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
G1/S transition of mitotic cell cycle
in utero embryonic development
cell fate specification
tissue homeostasis
cell migration involved in sprouting angiogenesis
cellular calcium ion homeostasis
cell adhesion
leukocyte cell-cell adhesion
cell-matrix adhesion
calcium-independent cell-matrix adhesion
transforming growth factor beta receptor signaling pathway
integrin-mediated signaling pathway
regulation of G-protein coupled receptor protein signaling pathway
positive regulation of cell proliferation
negative regulation of cell proliferation
germ cell migration
visual learning
regulation of collagen catabolic process
positive regulation of cell-substrate adhesion
positive regulation of neuron projection development
response to activity
cell migration
formation of radial glial scaffolds
positive regulation of cell migration
neuron projection development
negative regulation of cell projection organization
cell-substrate adhesion
response to nutrient levels
protein transport within lipid bilayer
cell-cell adhesion mediated by integrin
heterotypic cell-cell adhesion
response to gonadotropin
negative regulation of Rho protein signal transduction
response to drug
positive regulation of apoptotic process
stress fiber assembly
positive regulation of MAPK cascade
sarcomere organization
negative regulation of cell differentiation
negative regulation of neuron differentiation
positive regulation of neuron differentiation
positive regulation of endocytosis
mesodermal cell differentiation
axon extension
cardiac muscle tissue development
dendrite morphogenesis
positive regulation of peptidyl-tyrosine phosphorylation
leukocyte tethering or rolling
regulation of cell cycle
cardiac muscle cell differentiation
maternal process involved in female pregnancy
bicellular tight junction assembly
cellular response to mechanical stimulus
cellular response to vitamin D
cellular response to ionizing radiation
response to transforming growth factor beta
positive regulation of establishment of protein localization to plasma membrane
negative regulation of anoikis
glycoprotein binding
fibronectin binding
protease binding
actin binding
receptor activity
receptor binding
integrin binding
protein binding
collagen binding
kinase binding
protein kinase binding
protein domain specific binding
protein complex binding
peptide binding
laminin binding
metal ion binding
protein heterodimerization activity
cell adhesion molecule binding
alpha-actinin binding
collagen binding involved in cell-matrix adhesion
G1/S transition of mitotic cell cycle
in utero embryonic development
cell fate specification
tissue homeostasis
cell migration involved in sprouting angiogenesis
cellular calcium ion homeostasis
cell adhesion
leukocyte cell-cell adhesion
cell-matrix adhesion
calcium-independent cell-matrix adhesion
transforming growth factor beta receptor signaling pathway
integrin-mediated signaling pathway
regulation of G-protein coupled receptor protein signaling pathway
positive regulation of cell proliferation
negative regulation of cell proliferation
germ cell migration
visual learning
regulation of collagen catabolic process
positive regulation of cell-substrate adhesion
positive regulation of neuron projection development
response to activity
cell migration
formation of radial glial scaffolds
positive regulation of cell migration
neuron projection development
negative regulation of cell projection organization
cell-substrate adhesion
response to nutrient levels
protein transport within lipid bilayer
cell-cell adhesion mediated by integrin
heterotypic cell-cell adhesion
response to gonadotropin
negative regulation of Rho protein signal transduction
response to drug
positive regulation of apoptotic process
stress fiber assembly
positive regulation of MAPK cascade
sarcomere organization
negative regulation of cell differentiation
negative regulation of neuron differentiation
positive regulation of neuron differentiation
positive regulation of endocytosis
mesodermal cell differentiation
axon extension
cardiac muscle tissue development
dendrite morphogenesis
positive regulation of peptidyl-tyrosine phosphorylation
leukocyte tethering or rolling
regulation of cell cycle
cardiac muscle cell differentiation
maternal process involved in female pregnancy
bicellular tight junction assembly
cellular response to mechanical stimulus
cellular response to vitamin D
cellular response to ionizing radiation
response to transforming growth factor beta
positive regulation of establishment of protein localization to plasma membrane
negative regulation of anoikis
glycoprotein binding
fibronectin binding
protease binding
actin binding
receptor activity
receptor binding
integrin binding
protein binding
collagen binding
kinase binding
protein kinase binding
protein domain specific binding
protein complex binding
peptide binding
laminin binding
metal ion binding
protein heterodimerization activity
cell adhesion molecule binding
alpha-actinin binding
collagen binding involved in cell-matrix adhesion
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P273697 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P507943 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 801857 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 727741 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 514268 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 156219 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 855750 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 38515 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 693869 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 876263 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 742721 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 612733 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 477299 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 743664 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 115281 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 472440 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 489144 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 157257 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 837667 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 489966 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 884402 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 807280 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 884134 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 488461 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 85758 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 953239 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 353733 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 447075 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 128560 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 820260 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 244185 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 924757 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 434412 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 857482 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 949783 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 3890 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 69148 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 174464 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 158613 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 53202 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P273697 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P507943 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P507943 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P273697 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P507943 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P273697 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P273697 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700294207 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700275551 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 12092 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 340 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 61159 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 31219 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700275551 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700294207 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10812032 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812035 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812029 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812037 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812027 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812023 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812022 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812036 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10808983 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812038 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812028 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812033 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812034 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812031 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812026 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812039 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812030 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10812021 | - | - |
| Rat Genome 230 2.0 Array | 1368819_at | - | - |
| Rat Genome 230 2.0 Array | 1368819_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1387346_at | - | - |
| Rat Genome 230 2.0 Array | 1387346_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368819_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1387346_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1387346_at | - | - |
| Affymetrix HT Rat Focus Array | 1368819_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1900007223.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007238.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007233.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007224.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007228.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007230.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007232.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007234.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007225.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007229.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007227.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007231.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007226.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007236.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007235.rn.1 | TC1900000902.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1900007237.rn.1 | TC1900000902.rn.1 | RTA TC |
| Rat Expression Set 230 | 1387346_PM_at | - | - |
| Rat Expression Set 230 | 1368819_PM_at | - | - |
| Rat Expression Set 230 | 1387346_at | - | - |
| Rat Expression Set 230 | 1368819_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10812021 | - | - |
| Rat Genome U34 Set | rc_AI177366_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21590461 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1361299 | - | - |
| RatRef-12 Expression BeadChip | ILMN_63152 | - | - |
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