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Gene Symbol:: Shh
Gene Name:: sonic hedgehog
Gene Aliases:: -
Chromosome Location:: Chr.4: 718538 - 727691 on Build Rnor_6.0
Species:: Rat
Species Specific ID (Flybase ID):: -

Assay ID

Rn00568129_m1

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Availability	Inventoried
Catalog #	4331182
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Genomic Map
Assay Details
More Information

Assay Details

Gene Symbol: Shh
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017221.1	NP_058917.1	2 - 3	877		100
GenBank mRNA	AF162915.1	-	2 - 3	311		100
GenBank mRNA	L27340.1	-	2 - 3	877		100

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400002110.rn.1

Set Membership:

Ambion siRNA available

Amplicon length between 86 and 100

3' Most

Recommended Assay

Rattus norvegicus

Rat Androgen Panel

1700

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Shh

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P119002	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	763971	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	137083	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	23432	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240690	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	483172	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	530999	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P119002	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P119002	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P119002	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P423704	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	17954	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	72743	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10852677	-	-
Affymetrix Rat Gene 1.0 ST Array	10852678	-	-
Affymetrix Rat Gene 1.0 ST Array	10852679	-	-
Affymetrix Rat Gene 1.1 ST Array	10852676	-	-
Rat Genome 230 2.0 Array	1387584_PM_at	-	-
Rat Genome 230 2.0 Array	1387584_at	-	-
Affymetrix HT Rat Focus Array	1387584_at	-	-
Affymetrix HT Rat Focus Array	1387584_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400015079.rn.1	TC0400002110.rn.1	RTA TC
Rat Expression Set 230	1387584_PM_at	-	-
Rat Expression Set 230	1387584_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10852676	-	-
Rat Genome U34 Set	L27340_at	-	-

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