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- Gene Symbol:
-
Psen1 - Gene Name:
- presenilin 1
- Gene Aliases:
- -
- Chromosome Location:
- Chr.6: 107169513 - 107220957 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Psen1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_019163.3 | NP_062036.2 | 2 - 3 | 338 | 101 | |
| XM_006240321.2 | XP_006240383.1 | 4 - 5 | 608 | 101 | ||
| XM_006240322.2 | XP_006240384.1 | 4 - 5 | 861 | 101 | ||
| GenBank mRNA | BC070887.1 | - | 4 - 5 | 534 | 101 | |
| D82363.1 | - | 2 - 3 | 338 | 101 | ||
| D82578.1 | - | 2 - 3 | 338 | 101 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0600001144.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
autophagosome assembly
negative regulation of transcription by RNA polymerase II
blood vessel development
cell fate specification
somitogenesis
neuron migration
positive regulation of receptor recycling
negative regulation of protein phosphorylation
positive regulation of protein phosphorylation
heart looping
hematopoietic progenitor cell differentiation
T cell activation involved in immune response
myeloid leukocyte differentiation
neural retina development
negative regulation of protein kinase activity
protein glycosylation
proteolysis
membrane protein ectodomain proteolysis
calcium ion transport
mitochondrial transport
cellular calcium ion homeostasis
autophagy
cellular response to DNA damage stimulus
response to oxidative stress
negative regulation of epidermal growth factor-activated receptor activity
regulation of epidermal growth factor-activated receptor activity
Notch signaling pathway
Notch receptor processing
brain development
heart development
learning or memory
memory
post-embryonic development
protein transport
L-glutamate transmembrane transport
choline transport
synaptic vesicle targeting
protein processing
cerebral cortex cell migration
Cajal-Retzius cell differentiation
dorsal/ventral neural tube patterning
cerebral cortex development
neurogenesis
neuron differentiation
embryonic limb morphogenesis
forebrain development
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
endoplasmic reticulum calcium ion homeostasis
amyloid-beta formation
segmentation
intracellular signal transduction
locomotion
regulation of phosphorylation
eye photoreceptor cell development
amyloid precursor protein catabolic process
myeloid dendritic cell differentiation
positive regulation of apoptotic process
negative regulation of apoptotic process
positive regulation of catalytic activity
regulation of protein binding
positive regulation of MAP kinase activity
negative regulation of neuron apoptotic process
skin morphogenesis
cellular protein metabolic process
positive regulation of protein kinase activity
regulation of synaptic plasticity
thymus development
neuron development
skeletal system morphogenesis
brain morphogenesis
amyloid-beta metabolic process
epithelial cell proliferation
negative regulation of axonogenesis
positive regulation of coagulation
T cell receptor signaling pathway
neuron apoptotic process
negative regulation of ubiquitin-protein transferase activity
smooth endoplasmic reticulum calcium ion homeostasis
protein maturation
regulation of synaptic transmission, glutamatergic
canonical Wnt signaling pathway
regulation of resting membrane potential
calcium ion transmembrane transport
cell-cell adhesion
negative regulation of ubiquitin-dependent protein catabolic process
negative regulation of apoptotic signaling pathway
endopeptidase activity
aspartic-type endopeptidase activity
calcium channel activity
protein binding
beta-catenin binding
peptidase activity
PDZ domain binding
cadherin binding
autophagosome assembly
negative regulation of transcription by RNA polymerase II
blood vessel development
cell fate specification
somitogenesis
neuron migration
positive regulation of receptor recycling
negative regulation of protein phosphorylation
positive regulation of protein phosphorylation
heart looping
hematopoietic progenitor cell differentiation
T cell activation involved in immune response
myeloid leukocyte differentiation
neural retina development
negative regulation of protein kinase activity
protein glycosylation
proteolysis
membrane protein ectodomain proteolysis
calcium ion transport
mitochondrial transport
cellular calcium ion homeostasis
autophagy
cellular response to DNA damage stimulus
response to oxidative stress
negative regulation of epidermal growth factor-activated receptor activity
regulation of epidermal growth factor-activated receptor activity
Notch signaling pathway
Notch receptor processing
brain development
heart development
learning or memory
memory
post-embryonic development
protein transport
L-glutamate transmembrane transport
choline transport
synaptic vesicle targeting
protein processing
cerebral cortex cell migration
Cajal-Retzius cell differentiation
dorsal/ventral neural tube patterning
cerebral cortex development
neurogenesis
neuron differentiation
embryonic limb morphogenesis
forebrain development
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
endoplasmic reticulum calcium ion homeostasis
amyloid-beta formation
segmentation
intracellular signal transduction
locomotion
regulation of phosphorylation
eye photoreceptor cell development
amyloid precursor protein catabolic process
myeloid dendritic cell differentiation
positive regulation of apoptotic process
negative regulation of apoptotic process
positive regulation of catalytic activity
regulation of protein binding
positive regulation of MAP kinase activity
negative regulation of neuron apoptotic process
skin morphogenesis
cellular protein metabolic process
positive regulation of protein kinase activity
regulation of synaptic plasticity
thymus development
neuron development
skeletal system morphogenesis
brain morphogenesis
amyloid-beta metabolic process
epithelial cell proliferation
negative regulation of axonogenesis
positive regulation of coagulation
T cell receptor signaling pathway
neuron apoptotic process
negative regulation of ubiquitin-protein transferase activity
smooth endoplasmic reticulum calcium ion homeostasis
protein maturation
regulation of synaptic transmission, glutamatergic
canonical Wnt signaling pathway
regulation of resting membrane potential
calcium ion transmembrane transport
cell-cell adhesion
negative regulation of ubiquitin-dependent protein catabolic process
negative regulation of apoptotic signaling pathway
endopeptidase activity
aspartic-type endopeptidase activity
calcium channel activity
protein binding
beta-catenin binding
peptidase activity
PDZ domain binding
cadherin binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P044315 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 172254 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 310472 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 884514 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 648847 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 744941 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 496122 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 146597 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 666349 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 699893 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 723949 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 687819 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 844247 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 388574 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 117691 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 248094 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402466 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 910698 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 211740 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 696811 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 704355 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 249413 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 940549 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 427468 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 293726 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 233292 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 639845 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 817733 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 591333 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 544326 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 440198 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 560541 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 741702 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 556261 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 603223 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 158898 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 763908 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 726270 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 331569 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 167407 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 93150 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 104559 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 85510 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 59092 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P044315 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P044315 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P044315 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P142016 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700485743 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 11548 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 1819 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 50151 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 94525 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 31649 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 13930 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700485743 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10885813 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885818 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885814 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885819 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885810 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885812 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885820 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885817 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885821 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885809 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885811 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885816 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885815 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885822 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10885808 | - | - |
| Rat Genome 230 2.0 Array | 1368792_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1376075_at | - | - |
| Rat Genome 230 2.0 Array | 1368792_at | - | - |
| Rat Genome 230 2.0 Array | 1376075_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1376075_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1376075_at | - | - |
| Affymetrix HT Rat Focus Array | 1368792_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368792_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0600007959.rn.1 | TC0600001144.rn.1 | RTA TC |
| Rat Expression Set 230 | 1368792_at | - | - |
| Rat Expression Set 230 | 1376075_at | - | - |
| Rat Expression Set 230 | 1368792_PM_at | - | - |
| Rat Expression Set 230 | 1376075_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885808 | - | - |
| Rat Genome U34 Set | D82363_s_at | - | - |
| Rat Genome U34 Set | rc_AI009495_at | - | - |
| Rat Genome U34 Set | D82363_s_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21150134 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1351184 | - | - |
| RatRef-12 Expression BeadChip | ILMN_57702 | - | - |
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