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          • › Search Tool
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          • › Rn00571425_m1
          See other SCAF1 GE Assays ›
          Gene Symbol:
          Scaf1
          Gene Name:
          SR-related CTD-associated factor 1
          Gene Aliases:
          Sr-a1
          Chromosome Location:
          Chr.1: 100997724 - 101011563 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00571425_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Scaf1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_019384.1 NP_062257.1 3 - 4 326 86
          XM_008759409.1 XP_008757631.1 6 - 7 1289 86
          XM_008759410.1 XP_008757632.1 6 - 7 2366 86
          XM_008759411.1 XP_008757633.1 6 - 7 1236 86
          GenBank mRNA U49056.1 - 3 - 4 326 86

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100005369.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Scaf1

          Gene Ontology Categories:

          Function(s) Process(es)

          transcription by RNA polymerase II
          mRNA processing
          RNA splicing
          RNA binding
          protein domain specific binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P102326 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 214017 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 224964 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 514974 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 48352 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 923311 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 642845 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 265909 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 35372 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 36079 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 80563 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P102326 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P102326 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P102326 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P12049 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 701914676 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 702151471 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 99770 - -
          Agilent Rat cDNA Microarray (G4105A) 701293128 - -
          Agilent Rat cDNA Microarray (G4105A) 702151471 - -
          Agilent Rat cDNA Microarray (G4105A) 701914676 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10721607 - -
          Affymetrix Rat Gene 1.0 ST Array 10721609 - -
          Affymetrix Rat Gene 1.0 ST Array 10721610 - -
          Affymetrix Rat Gene 1.0 ST Array 10721614 - -
          Affymetrix Rat Gene 1.0 ST Array 10721608 - -
          Affymetrix Rat Gene 1.0 ST Array 10721613 - -
          Affymetrix Rat Gene 1.0 ST Array 10721612 - -
          Affymetrix Rat Gene 1.0 ST Array 10721611 - -
          Affymetrix Rat Gene 1.1 ST Array 10721606 - -
          Rat Genome 230 2.0 Array 1367984_PM_at - -
          Rat Genome 230 2.0 Array 1367984_at - -
          Affymetrix HT Rat Focus Array 1367984_at - -
          Affymetrix HT Rat Focus Array 1367984_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0100043583.rn.1 TC0100005369.rn.1 RTA TC
          Rat Expression Set 230 1367984_at - -
          Rat Expression Set 230 1367984_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10721606 - -
          Rat Genome U34 Set U49056_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21434201 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1351179 - -
          RatRef-12 Expression BeadChip ILMN_69734 - -

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          Host server : magellan-search-65cb46898d-nlgdw:80/100.66.128.131:80.
          git-commit: e5493f66f4597fc66e516c8a379ca3b6bed48f5b
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.33.0-2025.07.30-1.0