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          • › Search Tool
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          • › Rn00572605_m1
          See other ATXN3 GE Assays ›
          Gene Symbol:
          Atxn3
          Gene Name:
          ataxin 3
          Gene Aliases:
          Rsca3
          Chromosome Location:
          Chr.6: 125817420 - 125853461 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00572605_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Atxn3
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_021702.1 NP_067734.1 7 - 8 719 65
          XM_006240485.2 XP_006240547.1 8 - 9 755 65
          XM_006240486.2 XP_006240548.1 8 - 9 752 65
          XM_006240487.2 XP_006240549.1 8 - 9 755 65
          XM_006240488.2 XP_006240550.1 7 - 8 671 65
          XM_006240490.1 XP_006240552.1 8 - 9 781 65
          XM_006240493.2 XP_006240555.1 7 - 8 674 65
          GenBank mRNA Y12319.1 - 7 - 8 719 65

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0600003042.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Atxn3

          Gene Ontology Categories:

          Function(s) Process(es)

          microtubule cytoskeleton organization
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          ubiquitin-dependent protein catabolic process
          protein quality control for misfolded or incompletely synthesized proteins
          regulation of cell-substrate adhesion
          actin cytoskeleton organization
          cellular response to heat
          monoubiquitinated protein deubiquitination
          exploration behavior
          proteasome-mediated ubiquitin-dependent protein catabolic process
          intermediate filament cytoskeleton organization
          protein K63-linked deubiquitination
          histone H3 deacetylation
          protein K48-linked deubiquitination
          cellular response to misfolded protein
          RNA polymerase II transcription regulatory region sequence-specific DNA binding
          histone deacetylase activity
          thiol-dependent deubiquitinase
          protein binding
          omega peptidase activity
          ubiquitin protein ligase binding
          identical protein binding
          ATPase binding
          Lys63-specific deubiquitinase activity
          Lys48-specific deubiquitinase activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P108943 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 262230 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 78467 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 921382 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 433197 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 114372 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 715976 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 549633 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 181698 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 476041 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 531494 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 673938 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 146342 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 344603 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 344809 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 515404 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 134564 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 672657 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 664862 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 586031 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 747129 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 452149 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 21820 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 359781 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 519364 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 578543 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 154824 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 42150 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 13496 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P108943 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P108943 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P108943 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P248038 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 21033 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 90997 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10891824 - -
          Affymetrix Rat Gene 1.0 ST Array 10891829 - -
          Affymetrix Rat Gene 1.0 ST Array 10891821 - -
          Affymetrix Rat Gene 1.0 ST Array 10891822 - -
          Affymetrix Rat Gene 1.0 ST Array 10891825 - -
          Affymetrix Rat Gene 1.0 ST Array 10891823 - -
          Affymetrix Rat Gene 1.0 ST Array 10891828 - -
          Affymetrix Rat Gene 1.0 ST Array 10891826 - -
          Affymetrix Rat Gene 1.0 ST Array 10891827 - -
          Affymetrix Rat Gene 1.0 ST Array 10891819 - -
          Affymetrix Rat Gene 1.0 ST Array 10891820 - -
          Affymetrix Rat Gene 1.1 ST Array 10891818 - -
          Rat Genome 230 2.0 Array 1369826_PM_at - -
          Rat Genome 230 2.0 Array 1369826_at - -
          Affymetrix HT Rat Focus Array 1369826_at - -
          Affymetrix HT Rat Focus Array 1369826_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0600021595.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021603.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021611.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021583.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021585.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021596.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021594.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021601.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021605.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021598.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021609.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021597.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021600.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021584.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021590.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021593.rn.1 TC0600003042.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600021608.rn.1 TC0600003042.rn.1 RTA TC
          Rat Expression Set 230 1369826_at - -
          Rat Expression Set 230 1369826_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10891818 - -
          Rat Genome U34 Set Y12319cds_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20794405 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1351407 - -
          RatRef-12 Expression BeadChip ILMN_69664 - -

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