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- Gene Symbol:
-
Acvr1 - Gene Name:
- activin A receptor, type I
- Gene Aliases:
- -
- Chromosome Location:
- Chr.3: 44432476 - 44551733 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Acvr1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_024486.1 | NP_077812.1 | 5 - 6 | 785 | 93 | |
| XM_006234214.2 | XP_006234276.1 | 7 - 8 | 2390 | 93 | ||
| XM_008761862.1 | XP_008760084.1 | 8 - 9 | 2447 | 93 | ||
| XM_008761863.1 | XP_008760085.1 | 8 - 9 | 4691 | 93 | ||
| XM_008761864.1 | XP_008760086.1 | 8 - 9 | 4437 | 93 | ||
| XM_008761865.1 | XP_008760087.1 | 8 - 9 | 4480 | 93 | ||
| XM_008761866.1 | XP_008760088.1 | 8 - 9 | 1157 | 93 | ||
| XM_008761867.1 | XP_008760089.1 | 5 - 6 | 701 | 93 | ||
| GenBank mRNA | BC167754.1 | - | 6 - 7 | 956 | 93 | |
| L19341.1 | - | 5 - 6 | 785 | 93 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0300003158.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
G1/S transition of mitotic cell cycle
branching involved in blood vessel morphogenesis
urogenital system development
in utero embryonic development
gastrulation with mouth forming second
mesoderm formation
neural crest cell migration
acute inflammatory response
embryonic heart tube morphogenesis
mitral valve morphogenesis
atrial septum primum morphogenesis
protein phosphorylation
transforming growth factor beta receptor signaling pathway
germ cell development
determination of left/right symmetry
gastrulation
mesoderm development
heart development
negative regulation of signal transduction
positive regulation of pathway-restricted SMAD protein phosphorylation
peptidyl-threonine phosphorylation
regulation of ossification
positive regulation of bone mineralization
BMP signaling pathway
activin receptor signaling pathway
negative regulation of activin receptor signaling pathway
positive regulation of osteoblast differentiation
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
regulation of skeletal muscle tissue development
smooth muscle cell differentiation
pharyngeal system development
pathway-restricted SMAD protein phosphorylation
cardiac muscle cell fate commitment
endocardial cushion cell fate commitment
cellular response to glucocorticoid stimulus
positive regulation of determination of dorsal identity
negative regulation of extrinsic apoptotic signaling pathway
protein kinase activity
protein serine/threonine kinase activity
transmembrane receptor protein serine/threonine kinase activity
transforming growth factor beta receptor activity, type I
ATP binding
activin receptor activity, type I
growth factor binding
protein homodimerization activity
SMAD binding
metal ion binding
activin binding
transforming growth factor beta binding
G1/S transition of mitotic cell cycle
branching involved in blood vessel morphogenesis
urogenital system development
in utero embryonic development
gastrulation with mouth forming second
mesoderm formation
neural crest cell migration
acute inflammatory response
embryonic heart tube morphogenesis
mitral valve morphogenesis
atrial septum primum morphogenesis
protein phosphorylation
transforming growth factor beta receptor signaling pathway
germ cell development
determination of left/right symmetry
gastrulation
mesoderm development
heart development
negative regulation of signal transduction
positive regulation of pathway-restricted SMAD protein phosphorylation
peptidyl-threonine phosphorylation
regulation of ossification
positive regulation of bone mineralization
BMP signaling pathway
activin receptor signaling pathway
negative regulation of activin receptor signaling pathway
positive regulation of osteoblast differentiation
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
regulation of skeletal muscle tissue development
smooth muscle cell differentiation
pharyngeal system development
pathway-restricted SMAD protein phosphorylation
cardiac muscle cell fate commitment
endocardial cushion cell fate commitment
cellular response to glucocorticoid stimulus
positive regulation of determination of dorsal identity
negative regulation of extrinsic apoptotic signaling pathway
protein kinase activity
protein serine/threonine kinase activity
transmembrane receptor protein serine/threonine kinase activity
transforming growth factor beta receptor activity, type I
ATP binding
activin receptor activity, type I
growth factor binding
protein homodimerization activity
SMAD binding
metal ion binding
activin binding
transforming growth factor beta binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P136382 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 347615 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 423987 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 469507 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 749883 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 85494 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 668961 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 737404 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 470006 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 633002 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 91201 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 217274 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 780037 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 538658 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 432489 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 104571 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 180148 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 858950 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 602735 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 783184 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 223414 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 686932 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 205129 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 394679 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 926801 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 825803 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 763320 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 132002 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 275298 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 292309 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 376969 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 907167 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 456283 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 95535 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 426439 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 105383 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 486331 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 882993 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 931084 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 238245 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 768226 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 63699 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 307746 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 204881 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 718763 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 5769 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 461478 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 847889 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 399553 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 653197 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583980 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 158451 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 896445 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 711188 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 208398 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 390405 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 409671 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 653224 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 901904 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 549093 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 420924 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 690975 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 659315 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 830986 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 148056 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 180127 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 27488 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 82611 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 153289 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 92827 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 93806 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 40409 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P136382 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P136382 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P136382 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P454202 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700934470 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 56213 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 47330 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 22970 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 63637 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 65130 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 39065 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700934470 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10845436 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845431 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845440 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845435 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845438 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845433 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845432 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845439 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845434 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845437 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10845429 | - | - |
| Rat Genome 230 2.0 Array | 1398277_at | - | - |
| Rat Genome 230 2.0 Array | 1398277_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1385069_at | - | - |
| Rat Genome 230 2.0 Array | 1385069_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1379217_at | - | - |
| Rat Genome 230 2.0 Array | 1379217_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1385069_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1379217_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1398277_at | - | - |
| Affymetrix HT Rat Focus Array | 1379217_at | - | - |
| Affymetrix HT Rat Focus Array | 1398277_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1385069_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0300024369.rn.1 | TC0300003158.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0300024372.rn.1 | TC0300003158.rn.1 | RTA TC |
| Rat Expression Set 230 | 1398277_PM_at | - | - |
| Rat Expression Set 230 | 1398277_at | - | - |
| Rat Expression Set 230 | 1385069_PM_at | - | - |
| Rat Expression Set 230 | 1379217_PM_at | - | - |
| Rat Expression Set 230 | 1385069_at | - | - |
| Rat Expression Set 230 | 1379217_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10845429 | - | - |
| Rat Genome U34 Set | L19341_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 20787632 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1349367 | - | - |
| RatRef-12 Expression BeadChip | ILMN_62644 | - | - |
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