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          • Home
          • › Search Tool
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          • › Rn00589738_m1
          See other APOA5 GE Assays ›
          Gene Symbol:
          Apoa5
          Gene Name:
          apolipoprotein A-V
          Gene Aliases:
          apo-AV, apoA-V
          Chromosome Location:
          Chr.8: 50559079 - 50561717 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00589738_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Apoa5
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001277264.1 NP_001264193.1 2 - 3 168 96
          NM_080576.2 NP_542143.1 3 - 4 208 96
          XM_006242865.2 XP_006242927.1 3 - 4 306 96
          GenBank mRNA AF202887.1 - 2 - 3 153 96
          AF202888.1 - 2 - 3 153 96
          BC089780.1 - 3 - 4 208 96
          FQ210962.1 - 2 - 3 168 96
          FQ219463.1 - 2 - 3 168 96

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0800000623.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Apoa5

          Gene Ontology Categories:

          Function(s) Process(es)

          triglyceride metabolic process
          cholesterol biosynthetic process
          lipid transport
          response to hormone
          positive regulation of cholesterol esterification
          positive regulation of triglyceride catabolic process
          positive regulation of very-low-density lipoprotein particle remodeling
          triglyceride catabolic process
          regulation of intestinal cholesterol absorption
          animal organ regeneration
          neuron projection regeneration
          cholesterol efflux
          phospholipid efflux
          triglyceride-rich lipoprotein particle remodeling
          very-low-density lipoprotein particle remodeling
          high-density lipoprotein particle assembly
          lipoprotein metabolic process
          tissue regeneration
          cholesterol homeostasis
          reverse cholesterol transport
          positive regulation of fatty acid biosynthetic process
          phosphatidylcholine metabolic process
          positive regulation of lipid catabolic process
          positive regulation of lipoprotein lipase activity
          acylglycerol homeostasis
          triglyceride homeostasis
          molecular_function
          phospholipid binding
          enzyme activator activity
          heparin binding
          lipid binding
          cholesterol binding
          enzyme binding
          phosphatidylcholine binding
          lipase binding
          low-density lipoprotein particle receptor binding
          phosphatidylcholine-sterol O-acyltransferase activator activity
          lipase activator activity
          lipoprotein lipase activator activity
          lipoprotein particle receptor binding
          cholesterol transfer activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P700817 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 824982 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 812452 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P700817 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P700817 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P700817 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P700817 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10909728 - -
          Affymetrix Rat Gene 1.0 ST Array 10909730 - -
          Affymetrix Rat Gene 1.0 ST Array 10909732 - -
          Affymetrix Rat Gene 1.0 ST Array 10909731 - -
          Affymetrix Rat Gene 1.0 ST Array 10909729 - -
          Affymetrix Rat Gene 1.1 ST Array 10909727 - -
          Rat Genome 230 2.0 Array 1369011_PM_at - -
          Rat Genome 230 2.0 Array 1369011_at - -
          Affymetrix HT Rat Focus Array 1369011_at - -
          Affymetrix HT Rat Focus Array 1369011_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0800004044.rn.1 TC0800000623.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0800004046.rn.1 TC0800000623.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0800004045.rn.1 TC0800000623.rn.1 RTA TC
          Rat Expression Set 230 1369011_PM_at - -
          Rat Expression Set 230 1369011_at - -
          Affymetrix Rat Gene 1.0 ST Array 10909727 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22025331 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1359395 - -
          RatRef-12 Expression BeadChip ILMN_51589 - -

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