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          • › Search Tool
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          • › Rn00589889_m1
          See other CASKIN1 GE Assays ›
          Gene Symbol:
          Caskin1
          Gene Name:
          CASK interacting protein 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.10: 13853107 - 13874254 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00589889_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Caskin1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_080690.2 NP_542421.2 1 - 2 265 122
          XM_006245895.2 XP_006245957.1 1 - 2 1520 122
          XM_006245896.2 XP_006245958.1 1 - 2 1520 122
          XM_006245897.2 XP_006245959.1 1 - 2 1520 122
          GenBank mRNA AF451975.1 - 1 - 2 288 122

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1000000210.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Caskin1

          Gene Ontology Categories:

          Function(s) Process(es)

          signal transduction
          protein binding
          protein domain specific binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P150156 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 906878 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 270882 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 664093 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 213762 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 933879 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 695200 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 90025 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 860627 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 435836 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 117842 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 538131 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 248372 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 38376 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 158221 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 162280 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P150156 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P150156 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P150156 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P768530 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 40104 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 68734 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 101634 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10732106 - -
          Affymetrix Rat Gene 1.0 ST Array 10732103 - -
          Affymetrix Rat Gene 1.0 ST Array 10732111 - -
          Affymetrix Rat Gene 1.0 ST Array 10732096 - -
          Affymetrix Rat Gene 1.0 ST Array 10732109 - -
          Affymetrix Rat Gene 1.0 ST Array 10732110 - -
          Affymetrix Rat Gene 1.0 ST Array 10732090 - -
          Affymetrix Rat Gene 1.0 ST Array 10732099 - -
          Affymetrix Rat Gene 1.0 ST Array 10732098 - -
          Affymetrix Rat Gene 1.0 ST Array 10732091 - -
          Affymetrix Rat Gene 1.0 ST Array 10732104 - -
          Affymetrix Rat Gene 1.0 ST Array 10732102 - -
          Affymetrix Rat Gene 1.0 ST Array 10732095 - -
          Affymetrix Rat Gene 1.0 ST Array 10732097 - -
          Affymetrix Rat Gene 1.0 ST Array 10732101 - -
          Affymetrix Rat Gene 1.0 ST Array 10732107 - -
          Affymetrix Rat Gene 1.0 ST Array 10732108 - -
          Affymetrix Rat Gene 1.0 ST Array 10732105 - -
          Affymetrix Rat Gene 1.0 ST Array 10732088 - -
          Affymetrix Rat Gene 1.0 ST Array 10732093 - -
          Affymetrix Rat Gene 1.0 ST Array 10732089 - -
          Affymetrix Rat Gene 1.0 ST Array 10732100 - -
          Affymetrix Rat Gene 1.0 ST Array 10732094 - -
          Affymetrix Rat Gene 1.0 ST Array 10732112 - -
          Affymetrix Rat Gene 1.0 ST Array 10732092 - -
          Affymetrix Rat Gene 1.1 ST Array 10732087 - -
          Rat Genome 230 2.0 Array 1368425_at - -
          Rat Genome 230 2.0 Array 1368425_PM_at - -
          Affymetrix HT Rat Focus Array 1368425_at - -
          Affymetrix HT Rat Focus Array 1368425_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1000001910.rn.1 TC1000000210.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1000001913.rn.1 TC1000000210.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1000001911.rn.1 TC1000000210.rn.1 RTA TC
          Rat Expression Set 230 1368425_PM_at - -
          Rat Expression Set 230 1368425_at - -
          Affymetrix Rat Gene 1.0 ST Array 10732087 - -
          Rat Genome U34 Set rc_AI030734_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22145709 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1365348 - -
          RatRef-12 Expression BeadChip ILMN_51873 - -

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          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0