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          • › Rn00589996_m1
          See other CDKN1A GE Assays ›
          Gene Symbol:
          Cdkn1a
          Gene Name:
          cyclin-dependent kinase inhibitor 1A
          Gene Aliases:
          Cip1, UV96, Waf1
          Chromosome Location:
          Chr.20: 6348422 - 6358864 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00589996_m1
          Best Coverage
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          Availability Inventoried
          Catalog # 4331182
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Cdkn1a
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_080782.3 NP_542960.1 2 - 3 483 65
          XM_006256128.2 XP_006256190.1 2 - 3 547 65
          GenBank mRNA BC100620.1 - 2 - 3 483 7938247 65
          U24174.1 - 2 - 3 526 65

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC2000000249.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Endogenous Controls Detect Genomic DNA Recommended Assay Rattus norvegicus Rat Endogenous Controls Inventoried Rat_Endogenous_Controls Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Cdkn1a

          Panther Classification:

          Molecular Function -

          kinase inhibitor

          Gene Ontology Categories:

          Function(s) Process(es)

          regulation of cyclin-dependent protein serine/threonine kinase activity
          G1/S transition of mitotic cell cycle
          G2/M transition of mitotic cell cycle
          protein phosphorylation
          cellular response to DNA damage stimulus
          DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
          cell cycle arrest
          Ras protein signal transduction
          regulation of mitotic cell cycle
          negative regulation of cell proliferation
          response to UV
          response to toxic substance
          response to organic substance
          response to X-ray
          response to organonitrogen compound
          negative regulation of gene expression
          response to organic cyclic compound
          negative regulation of cell growth
          positive regulation of B cell proliferation
          organ regeneration
          cellular response to extracellular stimulus
          regulation of protein import into nucleus, translocation
          cellular response to heat
          negative regulation of phosphorylation
          response to drug
          intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
          negative regulation of apoptotic process
          positive regulation of programmed cell death
          negative regulation of cyclin-dependent protein serine/threonine kinase activity
          positive regulation of protein kinase activity
          response to arsenic-containing substance
          positive regulation of fibroblast proliferation
          response to glucocorticoid
          response to corticosterone
          regulation of cell cycle
          response to hyperoxia
          intestinal epithelial cell maturation
          cellular response to ionizing radiation
          cellular response to UV-B
          mitotic cell cycle arrest
          cellular senescence
          negative regulation of G1/S transition of mitotic cell cycle
          regulation of DNA biosynthetic process
          positive regulation of reactive oxygen species metabolic process
          cyclin-dependent protein serine/threonine kinase inhibitor activity
          protein binding
          cyclin-dependent protein kinase activating kinase activity
          cyclin binding
          ubiquitin protein ligase binding
          protein complex binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR2000002443.rn.1 TC2000000249.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR2000002449.rn.1 TC2000000249.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR2000002450.rn.1 TC2000000249.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR2000002453.rn.1 TC2000000249.rn.1 RTA TC

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