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          • › Search Tool
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          • › Rn00591070_m1
          See other DDX39B GE Assays ›
          Gene Symbol:
          Ddx39b
          Gene Name:
          DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
          Gene Aliases:
          Bat1, Bat1a, p47
          Chromosome Location:
          Chr.20: 4806103 - 4818596 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00591070_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ddx39b
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_133300.3 NP_579834.2 5 - 6 809 134
          GenBank mRNA BC080243.1 - 5 - 6 758 134
          M75168.1 - 4 - 5 714 134

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC2000001083.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ddx39b

          Gene Ontology Categories:

          Function(s) Process(es)

          spliceosomal complex assembly
          mRNA splicing, via spliceosome
          mRNA export from nucleus
          RNA splicing
          RNA secondary structure unwinding
          positive regulation of DNA-templated transcription, elongation
          viral mRNA export from host cell nucleus
          negative regulation of DNA damage checkpoint
          RNA binding
          RNA helicase activity
          ATP binding
          ATP-dependent activity, acting on RNA
          U6 snRNA binding
          U4 snRNA binding
          ATP-dependent protein binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P445195 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P445195 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P445195 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P445195 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P445195 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10831147 - -
          Affymetrix Rat Gene 1.0 ST Array 10831137 - -
          Affymetrix Rat Gene 1.0 ST Array 10831144 - -
          Affymetrix Rat Gene 1.0 ST Array 10831142 - -
          Affymetrix Rat Gene 1.0 ST Array 10831139 - -
          Affymetrix Rat Gene 1.0 ST Array 10831145 - -
          Affymetrix Rat Gene 1.0 ST Array 10831146 - -
          Affymetrix Rat Gene 1.0 ST Array 10831136 - -
          Affymetrix Rat Gene 1.0 ST Array 10831140 - -
          Affymetrix Rat Gene 1.0 ST Array 10831143 - -
          Affymetrix Rat Gene 1.0 ST Array 10831138 - -
          Affymetrix Rat Gene 1.1 ST Array 10831135 - -
          Rat Genome 230 2.0 Array 1390100_s_at - -
          Rat Genome 230 2.0 Array 1375850_PM_at - -
          Rat Genome 230 2.0 Array 1375850_at - -
          Rat Genome 230 2.0 Array 1390100_PM_s_at - -
          Rat Genome 230 2.0 Array 1388158_PM_at - -
          Rat Genome 230 2.0 Array 1388158_at - -
          Affymetrix HT Rat Focus Array 1388158_at - -
          Affymetrix HT Rat Focus Array 1388158_PM_at - -
          Affymetrix Rat Clariom S Assay PSR2000009072.rn.1 TC2000001083.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR2000009078.rn.1 TC2000001083.rn.1 RTA TC
          Rat Expression Set 230 1388158_PM_at - -
          Rat Expression Set 230 1388158_at - -
          Affymetrix Rat Gene 1.0 ST Array 10831135 - -
          Rat Genome U34 Set rc_AA892014_i_at - -
          Rat Genome U34 Set rc_AA892014_r_at - -
          Rat Genome U34 Set M75168_at - -
          Rat Genome U34 Set rc_AA892014_s_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22380820 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1363985 - -
          RatRef-12 Expression BeadChip ILMN_48438 - -

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