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          • › Search Tool
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          • › Rn00592446_m1
          See other HOPX GE Assays ›
          Gene Symbol:
          Hopx
          Gene Name:
          HOP homeobox
          Gene Aliases:
          GIIg15b, Hod, Obl
          Chromosome Location:
          Chr.14: 33354803 - 33362547 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00592446_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Hopx
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_133621.2 NP_598305.2 2 - 3 259 77
          GenBank mRNA AF474162.1 - 179 77
          AF492685.1 - 2 - 3 259 77
          BC070950.1 - 1 - 2 170 77
          FQ212752.1 - 2 - 3 256 77
          FQ220854.1 - 2 - 3 258 77
          FQ221225.1 - 2 - 3 274 77
          FQ222004.1 - 2 - 3 249 77
          FQ222724.1 - 2 - 3 191 77
          FQ229425.1 - 2 - 3 244 77
          FQ229457.1 - 2 - 3 236 77
          FQ229504.1 - 2 - 3 236 77
          FQ229663.1 - 2 - 3 248 77
          FQ229876.1 - 2 - 3 236 77
          FQ229892.1 - 2 - 3 274 77
          FQ230105.1 - 1 - 2 252 77
          FQ230629.1 - 2 - 3 257 77

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1400000378.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Hopx

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          trophectodermal cell differentiation
          transcription, DNA-templated
          heart development
          regulation of heart contraction
          histone deacetylation
          regulation of protein binding
          positive regulation of skeletal muscle tissue regeneration
          negative regulation of cell differentiation
          lung alveolus development
          positive regulation of striated muscle cell differentiation
          DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P404591 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 382922 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 970999 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 604829 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 867209 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 750193 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 313249 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 818318 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 116508 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P404591 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P404591 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P404591 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P404591 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 25675 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 70508 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 2394 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10772195 - -
          Affymetrix Rat Gene 1.0 ST Array 10772198 - -
          Affymetrix Rat Gene 1.0 ST Array 10772199 - -
          Affymetrix Rat Gene 1.0 ST Array 10772196 - -
          Affymetrix Rat Gene 1.1 ST Array 10772194 - -
          Rat Genome 230 2.0 Array 1367816_at - -
          Rat Genome 230 2.0 Array 1367816_PM_at - -
          Affymetrix HT Rat Focus Array 1367816_PM_at - -
          Affymetrix HT Rat Focus Array 1367816_at - -
          Affymetrix Rat Clariom S Assay PSR1400002966.rn.1 TC1400000378.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1400002967.rn.1 TC1400000378.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1400002969.rn.1 TC1400000378.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1400002963.rn.1 TC1400000378.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1400002968.rn.1 TC1400000378.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1400002965.rn.1 TC1400000378.rn.1 RTA TC
          Rat Expression Set 230 1367816_at - -
          Rat Expression Set 230 1367816_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10772194 - -
          Rat Genome U34 Set rc_AI102887_at - -
          Rat Genome U34 Set rc_AI102739_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22336986 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1363702 - -
          RatRef-12 Expression BeadChip ILMN_51495 - -

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          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
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