Hamburger Menu Button
Thermo Fisher Scientific Logo
Sign in
Don't have an account ? Create Account
  • Products
    • Antibodies
    • Cell Culture Media
    • Chemicals
    • Chromatography Columns and Cartridges
    • Lab Equipment
    • Lab Plasticware and Supplies
    • Microplates
    • Oligos, Primers, Probes and Genes
    • TaqMan Real-Time PCR Assays
    • Greener Products
    • See all product categories
  • Applications
    • Bioprocessing
    • Cell Culture and Transfection
    • Cell and Gene Therapy
    • Chromatography
    • Molecular Testing
    • Digital Solutions
    • DNA and RNA Extraction and Analysis
    • Spectroscopy, Elemental and Isotope Analysis
    • See all applications and techniques
  • Services
    • 360° CDMO and CRO Solutions
    • CDMO Services
    • CRO Services
    • Custom Services
    • Enterprise Services
    • Financial and Leasing Services
    • Instrument Services
    • Lab Informatics
    • OEM and Commercial Supply
    • Training Services
    • Unity Lab Services
    • See all services
  • Help and Support
    • How to Order
    • Instrument Support
    • Learning Centers
    • Register for an Account
    • Technical Support Centers
    • See all help and support topics
  • Popular
    • TaqMan Real-Time PCR Assays
      TaqMan Real-Time PCR Assays
    • Antibodies
      Antibodies
    • Oligos, Primers & Probes
      Oligos, Primers & Probes
    • GeneArt Gene Synthesis
      GeneArt Gene Synthesis
    • Cell Culture Plastics
      Cell Culture Plastics
  • Contact Us
  • Quick Order
  • Order Status and Tracking
  • Documents and Certificates
Thermo Fisher Scientific Logo

Search Thermo Fisher Scientific

Search All
Search button Close
          • Order Status
          • Quick Order
          • Sign in
            Sign in
            Don't have an account ? Create Account
            • Account
            • Check Order Status
            • Aspire Member Program
            • Connect: Lab, Data, Apps
            • Custom Products & Projects
            • Services Central
          This product has been added to your favorites list. Go to My Favorites

          System Message

          OKCancel
          LOADING ...
          • Home
          • › Search Tool
          • › Search Results
          • › Rn00593680_m1
          See other APOE GE Assays ›
          Gene Symbol:
          Apoe
          Gene Name:
          apolipoprotein E
          Gene Aliases:
          APOEA
          Chromosome Location:
          Chr.1: 80612894 - 80616820 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00593680_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

          LOADING...
          ×
          Back To Top

          Assay Details

          Gene Symbol: Apoe
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001270681.1 NP_001257610.1 3 - 4 349 99
          NM_001270682.1 NP_001257611.1 3 - 4 328 99
          NM_001270683.1 NP_001257612.1 3 - 4 315 99
          NM_001270684.1 NP_001257613.1 3 - 4 291 99
          NM_138828.3 NP_620183.2 3 - 4 309 99
          GenBank mRNA BC060313.1 - 3 - 4 282 6919048 99
          BC086581.1 - 3 - 4 252 7307758 99
          FQ209421.1 - 3 - 4 99
          FQ209426.1 - 3 - 4 280 99
          FQ209457.1 - 3 - 4 277 99
          FQ209625.1 - 3 - 4 278 99
          FQ209879.1 - 2 - 3 225 99
          FQ209926.1 - 3 - 4 278 99
          FQ210262.1 - 3 - 4 278 99
          FQ210410.1 - 3 - 4 278 99
          FQ211250.1 - 3 - 4 279 99
          FQ212760.1 - 3 - 4 278 99
          FQ212769.1 - 3 - 4 278 99
          FQ213060.1 - 3 - 4 274 99
          FQ213396.1 - 3 - 4 274 99
          FQ213533.1 - 3 - 4 281 99
          FQ213898.1 - 3 - 4 270 99
          FQ214072.1 - 3 - 4 278 99
          FQ214282.1 - 3 - 4 278 99
          FQ218386.1 - 3 - 4 277 99
          FQ218473.1 - 3 - 4 307 99
          FQ218485.1 - 3 - 4 278 99
          FQ218540.1 - 3 - 4 278 99
          FQ218699.1 - 3 - 4 280 99
          FQ218898.1 - 3 - 4 280 99
          FQ218953.1 - 2 - 3 334 99
          FQ219009.1 - 3 - 4 278 99
          FQ219124.1 - 2 - 3 238 99
          FQ219144.1 - 3 - 4 278 99
          FQ219202.1 - 2 - 3 229 99
          FQ219319.1 - 3 - 4 278 99
          FQ219432.1 - 3 - 4 278 99
          FQ219448.1 - 3 - 4 280 99
          FQ219490.1 - 3 - 4 278 99
          FQ219516.1 - 3 - 4 278 99
          FQ219534.1 - 3 - 4 278 99
          FQ219700.1 - 3 - 4 278 99
          FQ219711.1 - 3 - 4 278 99
          FQ220125.1 - 3 - 4 274 99
          FQ220532.1 - 3 - 4 274 99
          FQ220683.1 - 3 - 4 278 99
          FQ220752.1 - 3 - 4 309 99
          FQ220879.1 - 3 - 4 282 99
          FQ221856.1 - 3 - 4 278 99
          FQ229186.1 - 3 - 4 278 99
          FQ229530.1 - 2 - 3 229 99
          FQ229565.1 - 3 - 4 274 99
          FQ229759.1 - 3 - 4 278 99
          FQ229950.1 - 3 - 4 278 99
          FQ230084.1 - 3 - 4 278 99
          FQ231375.1 - 3 - 4 307 99
          J00705.1 - 2 - 3 236 99

          Back To Top

          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100004935.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Apoe

          Panther Classification:

          Molecular Function -

          apolipoprotein

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of endothelial cell proliferation
          response to dietary excess
          lipid metabolic process
          triglyceride metabolic process
          cholesterol biosynthetic process
          cholesterol catabolic process
          lipid transport
          cellular calcium ion homeostasis
          receptor-mediated endocytosis
          response to oxidative stress
          G-protein coupled receptor signaling pathway
          nitric oxide mediated signal transduction
          aging
          protein localization
          cholesterol metabolic process
          regulation of gene expression
          negative regulation of platelet activation
          positive regulation of cholesterol esterification
          positive regulation of cholesterol efflux
          peripheral nervous system axon regeneration
          long-chain fatty acid transport
          protein import
          triglyceride catabolic process
          cGMP-mediated signaling
          negative regulation of blood coagulation
          positive regulation of cGMP biosynthetic process
          neuron projection regeneration
          axon regeneration
          regulation of cholesterol transport
          regulation of Cdc42 protein signal transduction
          response to retinoic acid
          positive regulation of low-density lipoprotein particle receptor catabolic process
          response to insulin
          cholesterol efflux
          phospholipid efflux
          very-low-density lipoprotein particle remodeling
          low-density lipoprotein particle remodeling
          high-density lipoprotein particle remodeling
          high-density lipoprotein particle assembly
          chylomicron remnant clearance
          high-density lipoprotein particle clearance
          very-low-density lipoprotein particle clearance
          lipoprotein metabolic process
          lipoprotein biosynthetic process
          lipoprotein catabolic process
          vasodilation
          cholesterol homeostasis
          positive regulation of catalytic activity
          negative regulation of MAP kinase activity
          negative regulation of neuron apoptotic process
          negative regulation of blood vessel endothelial cell migration
          reverse cholesterol transport
          response to ethanol
          negative regulation of cholesterol biosynthetic process
          positive regulation of axon extension
          positive regulation of lipid biosynthetic process
          oligodendrocyte differentiation
          artery morphogenesis
          negative regulation of inflammatory response
          positive regulation of nitric-oxide synthase activity
          positive regulation of membrane protein ectodomain proteolysis
          negative regulation of lipid biosynthetic process
          maintenance of location in cell
          lipid homeostasis
          fatty acid homeostasis
          positive regulation of dendritic spine development
          negative regulation of dendritic spine development
          cellular response to interleukin-1
          cellular response to growth factor stimulus
          cellular response to cholesterol
          cardiovascular system development
          negative regulation of cholesterol efflux
          AMPA glutamate receptor clustering
          NMDA glutamate receptor clustering
          regulation of beta-amyloid clearance
          regulation of neuron death
          negative regulation of neuron death
          positive regulation of neuron death
          negative regulation of postsynaptic membrane organization
          positive regulation of postsynaptic membrane organization
          negative regulation of presynaptic membrane organization
          positive regulation of presynaptic membrane organization
          positive regulation of beta-amyloid formation
          negative regulation of beta-amyloid formation
          regulation of tau-protein kinase activity
          negative regulation of dendritic spine maintenance
          positive regulation of dendritic spine maintenance
          positive regulation of phospholipid efflux
          positive regulation of neurofibrillary tangle assembly
          negative regulation of phospholipid efflux
          negative regulation of lipid transport across blood brain barrier
          positive regulation of lipid transport across blood brain barrier
          beta-amyloid binding
          receptor binding
          lipid transporter activity
          phospholipid binding
          heparin binding
          lipid binding
          cholesterol binding
          antioxidant activity
          cholesterol transporter activity
          identical protein binding
          protein homodimerization activity
          hydroxyapatite binding
          metal chelating activity
          tau protein binding
          low-density lipoprotein particle receptor binding
          phosphatidylcholine-sterol O-acyltransferase activator activity
          very-low-density lipoprotein particle receptor binding
          lipoprotein particle binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR0100039021.rn.1 TC0100004935.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100039035.rn.1 TC0100004935.rn.1 RTA TC

          Back To Top

          Related Products

          • TaqMan® Fast Advanced Master Mix
          • SuperScript® VILO™ cDNA Synthesis Kit
          Ordering Plus Icon Minus Icon
          • Order Status
          • Order Help
          • Quick Order
          • Supply Center
          • eProcurement
          Support Plus Icon Minus Icon
          • Help and Support
          • Contact Us
          • Technical Support Centers
          • Documents and Certificates
          • Report a Site Issue
          Resources Plus Icon Minus Icon
          • Learning Centers
          • Promotions
          • Events and Webinars
          • Social Media
          About Thermo Fisher Plus Icon Minus Icon
          • About Us
          • Careers
          • Investors
          • News
          • Social Responsibility
          • Trademarks
          • Consumer Health Data Privacy Policy
          Our Portfolio Plus Icon Minus Icon
          • Thermo Scientific
          • Applied Biosystems
          • Invitrogen
          • Gibco
          • Ion Torrent
          • Fisher Scientific
          • Unity Lab Services
          • Patheon
          • PPD
          • Terms & Conditions
          • Privacy Information Center
          • Price & Freight Policy
          © 2006-2025 Thermo Fisher Scientific Inc. All rights reserved. All trademarks are the property of Thermo Fisher Scientific and its subsidiaries unless otherwise specified.
          United States flag icon
          United States

          Your items have has been added!


          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0