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- Gene Symbol:
-
Cdk5rap1 - Gene Name:
- CDK5 regulatory subunit associated protein 1
- Gene Aliases:
- -
- Chromosome Location:
- Chr.3: 149835953 - 149870429 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Cdk5rap1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_145721.2 | NP_663773.1 | 4 - 5 | 570 | 61 | |
| XM_006235306.1 | XP_006235368.1 | 5 - 6 | 885 | 61 | ||
| XM_006235307.2 | XP_006235369.1 | 6 - 7 | 776 | 61 | ||
| XM_008762302.1 | XP_008760524.1 | 6 - 7 | 779 | 61 | ||
| GenBank mRNA | AF177477.1 | - | 579 | 61 | ||
| BC066666.1 | - | 4 - 5 | 570 | 61 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0300004518.rn.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
regulation of cyclin-dependent protein serine/threonine kinase activity
tRNA modification
brain development
cell population proliferation
regulation of neuron differentiation
negative regulation of cyclin-dependent protein serine/threonine kinase activity
regulation of protein kinase activity
transferase activity
protein kinase regulator activity
protein-containing complex binding
metal ion binding
4 iron, 4 sulfur cluster binding
regulation of cyclin-dependent protein serine/threonine kinase activity
tRNA modification
brain development
cell population proliferation
regulation of neuron differentiation
negative regulation of cyclin-dependent protein serine/threonine kinase activity
regulation of protein kinase activity
transferase activity
protein kinase regulator activity
protein-containing complex binding
metal ion binding
4 iron, 4 sulfur cluster binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_42_P468805 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 519079 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 433402 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 584588 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 511065 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 635277 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 292657 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 948868 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 359472 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 620937 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 111015 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 478022 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 924169 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 681748 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 608008 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 362165 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 695189 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 447141 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 564373 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 115444 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 888975 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 456819 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 605631 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 396171 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 867610 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 538878 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 699440 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 619679 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 919593 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 144628 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 64072 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 348614 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 579101 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 392948 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 151381 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 315004 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 915175 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 907161 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 964426 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 440712 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 276071 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 610209 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 692230 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 93496 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 656616 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 294206 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 744462 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 633649 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 871963 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 287196 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 238975 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 86791 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 919104 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 429175 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 911062 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 883887 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 407585 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 792268 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 168411 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 124932 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 51006 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 152623 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 114316 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 136736 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 134934 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 49 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 108254 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 1275 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 143971 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 138173 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 177945 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P468805 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P468805 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_42_P468805 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_42_P468805 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 702035081 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 82466 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 94870 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 96903 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 22849 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 80901 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 68699 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 49359 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 94979 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 102802 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 88953 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 29217 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 3496 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 7845 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 702035081 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10850907 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850917 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850912 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850911 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850908 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850914 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850906 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850910 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850913 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850904 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850905 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850916 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850909 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850915 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10850903 | - | - |
| Rat Genome 230 2.0 Array | 1388053_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1388053_at | - | - |
| Affymetrix HT Rat Focus Array | 1388053_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1388053_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0300034594.rn.1 | TC0300004518.rn.1 | RTA TC |
| Rat Expression Set 230 | 1388053_at | - | - |
| Rat Expression Set 230 | 1388053_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10850903 | - | - |
| Rat Genome U34 Set | rc_AI175098_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 22420477 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1368983 | - | - |
| RatRef-12 Expression BeadChip | ILMN_60098 | - | - |
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