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- Gene Symbol:
-
Tgfbr1 - Gene Name:
- transforming growth factor, beta receptor 1
- Gene Aliases:
- Alk5, Skr4, Tgfr-1, tbetaR-I
- Chromosome Location:
- Chr.5: 63056079 - 63124107 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Tgfbr1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_012775.2 | NP_036907.2 | 1449 | 149 | ||
| XM_006238030.2 | XP_006238092.2 | 1463 | 149 | |||
| GenBank mRNA | BC087035.1 | - | 1391 | 149 | ||
| L26110.1 | - | 1418 | 149 | |||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0500000606.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
skeletal system development
angiogenesis
response to hypoxia
in utero embryonic development
kidney development
blastocyst development
epithelial to mesenchymal transition
negative regulation of endothelial cell proliferation
positive regulation of endothelial cell proliferation
lens development in camera-type eye
regulation of transcription, DNA-templated
protein phosphorylation
apoptotic process
signal transduction
transmembrane receptor protein serine/threonine kinase signaling pathway
transforming growth factor beta receptor signaling pathway
heart development
embryo implantation
aging
positive regulation of cell population proliferation
germ cell migration
male gonad development
response to toxic substance
post-embryonic development
anterior/posterior pattern specification
regulation of gene expression
positive regulation of gene expression
regulation of epithelial to mesenchymal transition
positive regulation of pathway-restricted SMAD protein phosphorylation
response to organic cyclic compound
peptidyl-serine phosphorylation
peptidyl-threonine phosphorylation
collagen fibril organization
positive regulation of cell growth
lung development
animal organ regeneration
regulation of protein ubiquitination
negative regulation of chondrocyte differentiation
activin receptor signaling pathway
response to prostaglandin E
intracellular signal transduction
regulation of growth
endothelial cell activation
negative regulation of apoptotic process
regulation of protein binding
endothelial cell migration
response to estrogen
negative regulation of endothelial cell differentiation
positive regulation of transcription, DNA-templated
protein autophosphorylation
thymus development
digestive tract development
neuron fate commitment
embryonic cranial skeleton morphogenesis
skeletal system morphogenesis
mesenchymal cell differentiation
artery morphogenesis
cell motility
positive regulation of cellular component movement
positive regulation of filopodium assembly
response to electrical stimulus
positive regulation of protein kinase B signaling
parathyroid gland development
roof of mouth development
pharyngeal system development
cardiac epithelial to mesenchymal transition
pathway-restricted SMAD protein phosphorylation
positive regulation of SMAD protein signal transduction
response to cholesterol
cellular response to transforming growth factor beta stimulus
positive regulation of apoptotic signaling pathway
negative regulation of extrinsic apoptotic signaling pathway
protein kinase activity
protein serine/threonine kinase activity
transforming growth factor beta-activated receptor activity
transforming growth factor beta receptor activity, type I
type II transforming growth factor beta receptor binding
ATP binding
growth factor binding
ubiquitin protein ligase binding
protein-containing complex binding
SMAD binding
metal ion binding
protein heterodimerization activity
transforming growth factor beta binding
I-SMAD binding
skeletal system development
angiogenesis
response to hypoxia
in utero embryonic development
kidney development
blastocyst development
epithelial to mesenchymal transition
negative regulation of endothelial cell proliferation
positive regulation of endothelial cell proliferation
lens development in camera-type eye
regulation of transcription, DNA-templated
protein phosphorylation
apoptotic process
signal transduction
transmembrane receptor protein serine/threonine kinase signaling pathway
transforming growth factor beta receptor signaling pathway
heart development
embryo implantation
aging
positive regulation of cell population proliferation
germ cell migration
male gonad development
response to toxic substance
post-embryonic development
anterior/posterior pattern specification
regulation of gene expression
positive regulation of gene expression
regulation of epithelial to mesenchymal transition
positive regulation of pathway-restricted SMAD protein phosphorylation
response to organic cyclic compound
peptidyl-serine phosphorylation
peptidyl-threonine phosphorylation
collagen fibril organization
positive regulation of cell growth
lung development
animal organ regeneration
regulation of protein ubiquitination
negative regulation of chondrocyte differentiation
activin receptor signaling pathway
response to prostaglandin E
intracellular signal transduction
regulation of growth
endothelial cell activation
negative regulation of apoptotic process
regulation of protein binding
endothelial cell migration
response to estrogen
negative regulation of endothelial cell differentiation
positive regulation of transcription, DNA-templated
protein autophosphorylation
thymus development
digestive tract development
neuron fate commitment
embryonic cranial skeleton morphogenesis
skeletal system morphogenesis
mesenchymal cell differentiation
artery morphogenesis
cell motility
positive regulation of cellular component movement
positive regulation of filopodium assembly
response to electrical stimulus
positive regulation of protein kinase B signaling
parathyroid gland development
roof of mouth development
pharyngeal system development
cardiac epithelial to mesenchymal transition
pathway-restricted SMAD protein phosphorylation
positive regulation of SMAD protein signal transduction
response to cholesterol
cellular response to transforming growth factor beta stimulus
positive regulation of apoptotic signaling pathway
negative regulation of extrinsic apoptotic signaling pathway
protein kinase activity
protein serine/threonine kinase activity
transforming growth factor beta-activated receptor activity
transforming growth factor beta receptor activity, type I
type II transforming growth factor beta receptor binding
ATP binding
growth factor binding
ubiquitin protein ligase binding
protein-containing complex binding
SMAD binding
metal ion binding
protein heterodimerization activity
transforming growth factor beta binding
I-SMAD binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P045651 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 745295 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 149959 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 75393 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 912055 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 123396 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 213118 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 74238 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 371225 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 475196 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 688361 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 664368 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 789964 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 598287 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 913965 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 543097 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 84345 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 721856 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 858855 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 47333 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 115671 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 13025 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 718692 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 216089 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 704872 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 613711 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 46394 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 199236 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 307700 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 674434 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 717821 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 676304 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 14816 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402486 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 430844 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 857378 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 675064 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 541276 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 640290 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 14248 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 913769 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 288572 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 719088 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 186390 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 972384 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 113368 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 177274 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 99896 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 117926 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 5312 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 179967 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 64102 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P045651 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P045651 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P045651 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P11556 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P640828 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P703479 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 630 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 41519 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 81559 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 75258 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 41085 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10868933 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868934 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868927 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868932 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868925 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868928 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868931 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868926 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868930 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868929 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868924 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10868923 | - | - |
| Rat Genome 230 2.0 Array | 1376636_at | - | - |
| Rat Genome 230 2.0 Array | 1376636_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1369504_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1369504_at | - | - |
| Affymetrix HT Rat Focus Array | 1369504_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1369504_at | - | - |
| Affymetrix HT Rat Focus Array | 1376636_at | - | - |
| Affymetrix HT Rat Focus Array | 1376636_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0500004104.rn.1 | TC0500000606.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0500004105.rn.1 | TC0500000606.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0500004106.rn.1 | TC0500000606.rn.1 | RTA TC |
| Rat Expression Set 230 | 1369504_at | - | - |
| Rat Expression Set 230 | 1369504_PM_at | - | - |
| Rat Expression Set 230 | 1376636_PM_at | - | - |
| Rat Expression Set 230 | 1376636_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10868923 | - | - |
| Rat Genome U34 Set | S81584_s_at | - | - |
| Rat Genome U34 Set | L26110_at | - | - |
| Rat Genome U34 Set | rc_AI236800_at | - | - |
| Rat Genome U34 Set | S81584_s_at | - | - |
| Rat Genome U34 Set | L26110_at | - | - |
| Rat Genome U34 Set | L26110_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21323429 | - | - |
| ABI Rat Genome Survey Microarray | 22297523 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_2039256 | - | - |
| RatRef-12 Expression BeadChip | ILMN_65380 | - | - |
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