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          • Home
          • › Search Tool
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          • › Rn00820828_g1
          See other HMGB2 GE Assays ›
          Gene Symbol:
          Hmgb2 Hmgb2l1
          Gene Name:
          high mobility group box 2
          high mobility group box 2-like 1
          Gene Aliases:
          Hmg2
          RGD1564519
          Chromosome Location:
          Chr.16: 36077617 - 36080191 on Build Rnor_6.0
          Chromosome Location:
          Chr.11: 49708042 - 49709128 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          -
          Assay ID Rn00820828_g1
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Hmgb2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_017187.2 NP_058883.1 4 - 5 616 91
          GenBank mRNA BC078866.1 - 3 - 4 474 91
          BC089854.1 - 4 - 5 616 91
          BC107455.1 - 4 - 5 645 91
          D84418.1 - 4 - 5 538 91
          FQ225084.1 - 4 - 5 580 91
          FQ229618.1 - 4 - 5 553 91
          FQ230440.1 - 4 - 5 580 91
          FQ233747.1 - 4 - 5 554 91
          Gene Symbol: Hmgb2l1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq XM_573272.5 XP_573272.3 1 553 91

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1600001549.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Detect Genomic DNA Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Hmgb2
          Click here to find siRNAs for Gene Hmgb2l1

          Gene Ontology Categories:

          Function(s) Process(es)

          positive regulation of endothelial cell proliferation
          base-excision repair, DNA ligation
          chromatin remodeling
          regulation of transcription by RNA polymerase II
          spermatogenesis
          spermatid nucleus differentiation
          nervous system development
          male gonad development
          animal organ regeneration
          positive regulation of nuclease activity
          positive regulation of DNA binding
          positive regulation of erythrocyte differentiation
          positive regulation of megakaryocyte differentiation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          response to steroid hormone
          positive chemotaxis
          positive regulation of DNA metabolic process
          cell chemotaxis
          cellular response to lipopolysaccharide
          negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
          biological_process
          transcription cis-regulatory region binding
          DNA binding
          damaged DNA binding
          double-stranded DNA binding
          DNA-binding transcription factor activity
          RNA binding
          lipid binding
          DNA binding, bending
          protein domain specific binding
          nucleosomal histone binding
          chemoattractant activity
          RAGE receptor binding
          molecular_function

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P107106 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P041526 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 748499 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P041526 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P107106 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P107106 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P041526 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P041526 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P107106 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P200647 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 702135713 - -
          Agilent Rat cDNA Microarray (G4105A) 702135713 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10791498 - -
          Affymetrix Rat Gene 1.0 ST Array 10717169 - -
          Affymetrix Rat Gene 1.0 ST Array 10791499 - -
          Affymetrix Rat Gene 1.0 ST Array 10773169 - -
          Affymetrix Rat Gene 1.0 ST Array 10750877 - -
          Affymetrix Rat Gene 1.0 ST Array 10787785 - -
          Affymetrix Rat Gene 1.1 ST Array 10787784 - -
          Affymetrix Rat Gene 1.1 ST Array 10791497 - -
          Affymetrix Rat Gene 1.1 ST Array 10717168 - -
          Affymetrix Rat Gene 1.1 ST Array 10750876 - -
          Affymetrix Rat Gene 1.1 ST Array 10773168 - -
          Rat Genome 230 2.0 Array 1367676_at - -
          Rat Genome 230 2.0 Array 1367676_PM_at - -
          Affymetrix HT Rat Focus Array 1367676_at - -
          Affymetrix HT Rat Focus Array 1367676_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1600011803.rn.1 TC1600001549.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600011804.rn.1 TC1600001549.rn.1 RTA TC
          Rat Expression Set 230 1367676_at - -
          Rat Expression Set 230 1367676_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10750876 - -
          Affymetrix Rat Gene 1.0 ST Array 10773168 - -
          Affymetrix Rat Gene 1.0 ST Array 10787784 - -
          Affymetrix Rat Gene 1.0 ST Array 10791497 - -
          Affymetrix Rat Gene 1.0 ST Array 10717168 - -
          Rat Genome U34 Set D84418_s_at - -
          Rat Genome U34 Set D84418_r_at - -
          Rat Genome U34 Set rc_AI008836_s_at - -
          Rat Genome U34 Set rc_AI008836_s_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20814038 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1351907 - -
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1371503 - -
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1372675 - -
          RatRef-12 Expression BeadChip ILMN_57050 - -
          RatRef-12 Expression BeadChip ILMN_61010 - -

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          git-commit: 2310f86ea667df8f532fad8d69a2d0b8b05e2a1e
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