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          • › Search Tool
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          • › Rn00821572_g1
          See other H3F3B GE Assays ›
          Gene Symbol:
          H3f3b
          Gene Name:
          H3 histone, family 3B
          Gene Aliases:
          H3.3B
          Chromosome Location:
          Chr.10: 104573666 - 104575890 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00821572_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: H3f3b
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_053985.2 NP_446437.1 2 - 3 263 85
          GenBank mRNA BC063159.1 - 2 - 3 263 85
          BC078759.1 - 2 - 3 232 85
          FQ215473.1 - 2 - 3 256 85
          FQ225133.1 - 2 - 3 258 85
          FQ225528.1 - 2 - 3 256 85
          FQ226787.1 - 2 - 3 256 85
          FQ227040.1 - 2 - 3 258 85
          FQ227260.1 - 2 - 3 261 85
          FQ227957.1 - 2 - 3 258 85
          FQ228569.1 - 2 - 3 258 85
          FQ232451.1 - 2 - 3 192 85
          FQ232671.1 - 2 - 3 256 85
          FQ232852.1 - 2 - 3 258 85
          FQ234172.1 - 2 - 3 258 85
          FQ234408.1 - 2 - 3 256 85
          FQ235236.1 - 2 - 3 261 85
          X73683.1 - 2 - 3 254 85

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1000004137.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene H3f3b

          Gene Ontology Categories:

          Function(s) Process(es)

          osteoblast differentiation
          nucleosome assembly
          DNA replication-independent nucleosome assembly
          nucleus organization
          brain development
          response to hormone
          positive regulation of cell growth
          muscle cell differentiation
          regulation of centromere complex assembly
          negative regulation of chromosome condensation
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          RNA polymerase II core promoter sequence-specific DNA binding
          molecular_function
          DNA binding
          nucleosomal DNA binding
          protein heterodimerization activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P518041 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P188326 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 720820 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P188326 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P188326 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P188326 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P518041 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P481749 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P556586 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 29480 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10728698 - -
          Affymetrix Rat Gene 1.0 ST Array 10749072 - -
          Affymetrix Rat Gene 1.0 ST Array 10749073 - -
          Affymetrix Rat Gene 1.0 ST Array 10888126 - -
          Affymetrix Rat Gene 1.0 ST Array 10770340 - -
          Affymetrix Rat Gene 1.0 ST Array 10896550 - -
          Affymetrix Rat Gene 1.0 ST Array 10770341 - -
          Affymetrix Rat Gene 1.0 ST Array 10749074 - -
          Affymetrix Rat Gene 1.0 ST Array 10770338 - -
          Affymetrix Rat Gene 1.0 ST Array 10749071 - -
          Affymetrix Rat Gene 1.0 ST Array 10739542 - -
          Affymetrix Rat Gene 1.0 ST Array 10896548 - -
          Affymetrix Rat Gene 1.0 ST Array 10728699 - -
          Affymetrix Rat Gene 1.0 ST Array 10770339 - -
          Affymetrix Rat Gene 1.0 ST Array 10753922 - -
          Affymetrix Rat Gene 1.1 ST Array 10896549 - -
          Affymetrix Rat Gene 1.1 ST Array 10888125 - -
          Affymetrix Rat Gene 1.1 ST Array 10749070 - -
          Affymetrix Rat Gene 1.1 ST Array 10739541 - -
          Affymetrix Rat Gene 1.1 ST Array 10728697 - -
          Affymetrix Rat Gene 1.1 ST Array 10753921 - -
          Affymetrix Rat Gene 1.1 ST Array 10896547 - -
          Affymetrix Rat Gene 1.1 ST Array 10770337 - -
          Rat Genome 230 2.0 Array 1370190_PM_at - -
          Rat Genome 230 2.0 Array 1370190_at - -
          Rat Genome 230 2.0 Array 1398849_PM_at - -
          Rat Genome 230 2.0 Array 1390019_at - -
          Rat Genome 230 2.0 Array 1398888_PM_at - -
          Rat Genome 230 2.0 Array 1398888_at - -
          Rat Genome 230 2.0 Array 1398849_at - -
          Rat Genome 230 2.0 Array 1390019_PM_at - -
          Affymetrix HT Rat Focus Array 1398849_PM_at - -
          Affymetrix HT Rat Focus Array 1390019_at - -
          Affymetrix HT Rat Focus Array 1398849_at - -
          Affymetrix HT Rat Focus Array 1390019_PM_at - -
          Affymetrix HT Rat Focus Array 1370190_PM_at - -
          Affymetrix HT Rat Focus Array 1398888_at - -
          Affymetrix HT Rat Focus Array 1370190_at - -
          Affymetrix HT Rat Focus Array 1398888_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1000037532.rn.1 TC1000004137.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1000037529.rn.1 TC1000004137.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1000037530.rn.1 TC1000004137.rn.1 RTA TC
          Rat Expression Set 230 1398888_at - -
          Rat Expression Set 230 1370190_at - -
          Rat Expression Set 230 1398849_at - -
          Rat Expression Set 230 1398849_PM_at - -
          Rat Expression Set 230 1398888_PM_at - -
          Rat Expression Set 230 1390019_PM_at - -
          Rat Expression Set 230 1370190_PM_at - -
          Rat Expression Set 230 1390019_at - -
          Affymetrix Rat Gene 1.0 ST Array 10770337 - -
          Affymetrix Rat Gene 1.0 ST Array 10749070 - -
          Affymetrix Rat Gene 1.0 ST Array 10728697 - -
          Affymetrix Rat Gene 1.0 ST Array 10896549 - -
          Affymetrix Rat Gene 1.0 ST Array 10753921 - -
          Rat Genome U34 Set rc_AA875069_at - -
          Rat Genome U34 Set rc_AI177503_at - -
          Rat Genome U34 Set rc_AI010256_at - -
          Rat Genome U34 Set rc_AI136747_s_at - -
          Rat Genome U34 Set rc_AI169289_at - -
          Rat Genome U34 Set rc_AI170709_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20853326 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1349008 - -
          RatRef-12 Expression BeadChip ILMN_63000 - -

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