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          • › Search Tool
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          • › Rn01179807_m1
          See other SFPQ GE Assays ›
          Gene Symbol:
          Sfpq
          Gene Name:
          splicing factor proline/glutamine-rich
          Gene Aliases:
          -
          Chromosome Location:
          Chr.5: 145079803 - 145088517 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01179807_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Sfpq
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001025271.1 NP_001020442.1 9 - 10 2034 71
          GenBank mRNA AF036335.1 - 5 - 6 564 71
          BC098731.1 - 9 - 10 2034 71
          FQ229853.1 - 5 - 6 576 71

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0500001487.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Sfpq

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          alternative mRNA splicing, via spliceosome
          cellular response to DNA damage stimulus
          regulation of circadian rhythm
          negative regulation of circadian rhythm
          positive regulation of sister chromatid cohesion
          negative regulation of transcription, DNA-templated
          chromosome organization
          regulation of cell cycle
          histone H3 deacetylation
          positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
          nucleotide binding
          transcription cis-regulatory region binding
          core promoter sequence-specific DNA binding
          nucleic acid binding
          RNA binding
          histone deacetylase binding

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P15730 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 831739 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 917682 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 854517 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 612981 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 727834 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 384600 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 135876 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 163768 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15730 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15730 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P15730 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P15730 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P361357 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700301081 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700513481 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 12381 - -
          Agilent Rat cDNA Microarray (G4105A) 700301081 - -
          Agilent Rat cDNA Microarray (G4105A) 700513481 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10872111 - -
          Affymetrix Rat Gene 1.0 ST Array 10872113 - -
          Affymetrix Rat Gene 1.0 ST Array 10872110 - -
          Affymetrix Rat Gene 1.0 ST Array 10872103 - -
          Affymetrix Rat Gene 1.0 ST Array 10872106 - -
          Affymetrix Rat Gene 1.0 ST Array 10872109 - -
          Affymetrix Rat Gene 1.0 ST Array 10872105 - -
          Affymetrix Rat Gene 1.0 ST Array 10872104 - -
          Affymetrix Rat Gene 1.0 ST Array 10872102 - -
          Affymetrix Rat Gene 1.0 ST Array 10872108 - -
          Affymetrix Rat Gene 1.0 ST Array 10872112 - -
          Affymetrix Rat Gene 1.0 ST Array 10872107 - -
          Affymetrix Rat Gene 1.1 ST Array 10872101 - -
          Rat Genome 230 2.0 Array 1370899_PM_at - -
          Rat Genome 230 2.0 Array 1388132_at - -
          Rat Genome 230 2.0 Array 1370899_at - -
          Rat Genome 230 2.0 Array 1378595_at - -
          Rat Genome 230 2.0 Array 1378595_PM_at - -
          Rat Genome 230 2.0 Array 1388132_PM_at - -
          Affymetrix HT Rat Focus Array 1370899_at - -
          Affymetrix HT Rat Focus Array 1370899_PM_at - -
          Affymetrix HT Rat Focus Array 1388132_PM_at - -
          Affymetrix HT Rat Focus Array 1388132_at - -
          Affymetrix Rat Clariom S Assay PSR0500010509.rn.1 TC0500001487.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0500010508.rn.1 TC0500001487.rn.1 RTA TC
          Rat Expression Set 230 1388132_PM_at - -
          Rat Expression Set 230 1388132_at - -
          Rat Expression Set 230 1370899_PM_at - -
          Rat Expression Set 230 1370899_at - -
          Rat Expression Set 230 1378595_at - -
          Rat Expression Set 230 1378595_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10872101 - -
          Rat Genome U34 Set AF036335_at - -
          Rat Genome U34 Set AF036335_g_at - -
          Rat Genome U34 Set rc_AA956890_g_at - -
          Rat Genome U34 Set rc_AA963280_at - -
          Rat Genome U34 Set rc_AA956890_at - -
          Rat Genome U34 Set rc_AA964033_at - -
          Rat Genome U34 Set rc_AI236796_at - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1371231 - -

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          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0