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- Gene Symbol:
-
LOC499179Top1 - Gene Name:
- similar to topoisomerase (DNA) I
- topoisomerase (DNA) I
- Gene Aliases:
- -
- Ab2-086
- Chromosome Location:
- Chr.1: 134991934 - 135000640 on Build Rnor_6.0
- Chromosome Location:
- Chr.3: 156635688 - 156717686 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: LOC499179 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | XM_008759598.1 | XP_008757820.1 | 4 | 1600 | 72 | |
| Gene Symbol: Top1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_022615.1 | NP_072137.1 | 14 - 15 | 1462 | 72 | |
| GenBank mRNA | AF140782.1 | - | 14 - 15 | 1462 | 72 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0300002215.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Detect Genomic DNA
Rattus norvegicus
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
DNA replication
DNA topological change
chromatin remodeling
chromosome segregation
circadian rhythm
response to temperature stimulus
rRNA transcription
response to xenobiotic stimulus
response to gamma radiation
animal organ regeneration
circadian regulation of gene expression
embryonic cleavage
response to cAMP
cellular response to luteinizing hormone stimulus
core promoter sequence-specific DNA binding
DNA binding
chromatin binding
RNA binding
DNA topoisomerase type I (single strand cut, ATP-independent) activity
DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
chromatin DNA binding
protein-containing complex binding
DNA replication
DNA topological change
chromatin remodeling
chromosome segregation
circadian rhythm
response to temperature stimulus
rRNA transcription
response to xenobiotic stimulus
response to gamma radiation
animal organ regeneration
circadian regulation of gene expression
embryonic cleavage
response to cAMP
cellular response to luteinizing hormone stimulus
core promoter sequence-specific DNA binding
DNA binding
chromatin binding
RNA binding
DNA topoisomerase type I (single strand cut, ATP-independent) activity
DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
chromatin DNA binding
protein-containing complex binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P241862 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P031456 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 349786 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 451211 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 617599 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 341454 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 416746 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 913219 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 308794 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 242332 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 244608 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 823580 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 40245 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 228823 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 356591 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 449458 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 634974 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 408155 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 107937 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 815620 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 638322 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 758709 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 845159 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 138893 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 914683 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 626751 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 160652 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 291766 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 176527 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 253219 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 399370 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 825717 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 39 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 130595 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 939707 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 561341 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 163131 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 260639 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 122885 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 619893 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 854276 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 620045 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 97908 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 695056 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 667510 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 316517 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 503339 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 584017 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 72837 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 247297 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 681268 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 926522 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 598650 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 555797 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 809667 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 811505 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 692854 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 837480 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 498197 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 258502 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 45640 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 230317 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 451610 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 416244 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 169081 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 46513 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 13678 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 29228 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 21455 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 90225 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 80959 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 79448 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 39313 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 70504 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 8036 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 176311 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P031456 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P241862 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P031456 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P241862 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P241862 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P031456 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P438054 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P241862 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 24199 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 7830 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 53625 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 31135 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 76844 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 84020 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10841831 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841832 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10707941 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841842 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841846 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841835 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841837 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841847 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10707940 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841840 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841848 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841833 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841844 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841845 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841839 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841841 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841838 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841843 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841836 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841849 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841830 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841834 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10841829 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10707939 | - | - |
| Rat Genome 230 2.0 Array | 1369421_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1399046_at | - | - |
| Rat Genome 230 2.0 Array | 1399046_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1369421_at | - | - |
| Affymetrix HT Rat Focus Array | 1369421_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1369421_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0300016462.rn.1 | TC0300002215.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0300016463.rn.1 | TC0300002215.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0300016465.rn.1 | TC0300002215.rn.1 | RTA TC |
| Rat Expression Set 230 | 1399046_at | - | - |
| Rat Expression Set 230 | 1369421_at | - | - |
| Rat Expression Set 230 | 1369421_PM_at | - | - |
| Rat Expression Set 230 | 1399046_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10841829 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10707939 | - | - |
| Rat Genome U34 Set | AA848218_at | - | - |
| Rat Genome U34 Set | rc_AA819468_at | - | - |
| Rat Genome U34 Set | AA848218_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1349123 | - | - |
| RatRef-12 Expression BeadChip | ILMN_56331 | - | - |
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