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          • Home
          • › Search Tool
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          • › Rn01316994_m1
          See other PITX2 GE Assays ›
          Gene Symbol:
          Pitx2
          Gene Name:
          paired-like homeodomain 2
          Gene Aliases:
          Pitx-2, Pitx2c, Ptx2
          Chromosome Location:
          Chr.2: 233602732 - 233621055 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01316994_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Pitx2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001042505.1 NP_001035970.1 2 - 3 755 58
          NM_019334.2 NP_062207.1 3 - 4 456 58
          GenBank mRNA AF039832.1 - 3 - 4 456 58
          AJ222971.1 - 2 - 3 763 58
          AJ222972.1 - 3 - 4 509 58
          EF519321.1 - 2 - 3 245 58

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0200002176.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Pitx2

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          branching involved in blood vessel morphogenesis
          vasculogenesis
          in utero embryonic development
          neuron migration
          extraocular skeletal muscle development
          atrioventricular valve development
          cardiac neural crest cell migration involved in outflow tract morphogenesis
          pulmonary myocardium development
          regulation of transcription, DNA-templated
          regulation of transcription by RNA polymerase II
          transcription by RNA polymerase II
          determination of left/right symmetry
          brain development
          heart development
          skeletal muscle tissue development
          myoblast fusion
          male gonad development
          female gonad development
          anatomical structure morphogenesis
          response to hormone
          animal organ morphogenesis
          Wnt signaling pathway
          subthalamic nucleus development
          hypothalamus cell migration
          pituitary gland development
          neuron differentiation
          lung development
          regulation of cell migration
          embryonic camera-type eye development
          response to vitamin A
          embryonic hindlimb morphogenesis
          vascular associated smooth muscle cell differentiation
          deltoid tuberosity development
          regulation of cell population proliferation
          odontogenesis of dentin-containing tooth
          odontogenesis
          camera-type eye development
          positive regulation of DNA binding
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          spleen development
          embryonic digestive tract morphogenesis
          cardiac muscle tissue development
          cardiac muscle cell differentiation
          atrial cardiac muscle tissue morphogenesis
          ventricular cardiac muscle cell development
          digestive system development
          ventricular septum morphogenesis
          left lung morphogenesis
          pulmonary vein morphogenesis
          superior vena cava morphogenesis
          endodermal digestive tract morphogenesis
          iris morphogenesis
          cell proliferation involved in outflow tract morphogenesis
          left/right axis specification
          positive regulation of myoblast proliferation
          transcription cis-regulatory region binding
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          DNA binding
          chromatin binding
          DNA-binding transcription factor activity
          transcription coactivator activity
          transcription factor binding
          chromatin DNA binding
          identical protein binding
          protein homodimerization activity
          sequence-specific DNA binding
          phosphoprotein binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P072648 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 512535 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 120346 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 385735 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 896757 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 938911 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 287663 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 758388 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 314441 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 877262 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 434479 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 704058 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 913644 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 248368 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 213265 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 492168 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 464687 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 523503 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 314515 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 91667 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 21436 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 9075 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P072648 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P072648 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P072648 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P718970 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 702076272 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 74096 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 22760 - -
          Agilent Rat cDNA Microarray (G4105A) 702076272 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10818994 - -
          Affymetrix Rat Gene 1.0 ST Array 10818997 - -
          Affymetrix Rat Gene 1.0 ST Array 10818995 - -
          Affymetrix Rat Gene 1.0 ST Array 10818991 - -
          Affymetrix Rat Gene 1.0 ST Array 10818993 - -
          Affymetrix Rat Gene 1.0 ST Array 10818990 - -
          Affymetrix Rat Gene 1.0 ST Array 10818996 - -
          Affymetrix Rat Gene 1.1 ST Array 10818989 - -
          Rat Genome 230 2.0 Array 1368785_PM_a_at - -
          Rat Genome 230 2.0 Array 1368785_a_at - -
          Affymetrix HT Rat Focus Array 1368785_a_at - -
          Affymetrix HT Rat Focus Array 1368785_PM_a_at - -
          Affymetrix Rat Clariom S Assay PSR0200015066.rn.1 TC0200002176.rn.1 RTA TC
          Rat Expression Set 230 1368785_a_at - -
          Rat Expression Set 230 1368785_PM_a_at - -
          Affymetrix Rat Gene 1.0 ST Array 10818989 - -
          Rat Genome U34 Set AF039832_g_at - -
          Rat Genome U34 Set AF039832_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21740405 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1369098 - -
          RatRef-12 Expression BeadChip ILMN_64864 - -

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          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0