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          • Home
          • › Search Tool
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          • › Rn01399572_m1
          See other NFKB1 GE Assays ›
          Gene Symbol:
          Nfkb1
          Gene Name:
          nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
          Gene Aliases:
          EBP-1, NF-kB
          Chromosome Location:
          Chr.2: 240773520 - 240890053 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01399572_m1
          Best Coverage
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          Availability Inventoried
          Catalog # 4331182
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Nfkb1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001276711.1 NP_001263640.1 13 - 14 1561 67
          XM_006233358.2 XP_006233420.1 11 - 12 1217 67
          XM_006233360.2 XP_006233422.1 11 - 12 1217 67

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0200004748.rn.1

          Set Membership:

          Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Panther Classification:

          Molecular Function -

          Rel homology transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          negative regulation of cytokine production
          regulation of transcription, DNA-templated
          transcription from RNA polymerase II promoter
          inflammatory response
          response to oxidative stress
          signal transduction
          I-kappaB kinase/NF-kappaB signaling
          response to bacterium
          negative regulation of calcidiol 1-monooxygenase activity
          response to cytokine
          response to muscle stretch
          NIK/NF-kappaB signaling
          negative regulation of apoptotic process
          negative regulation of interleukin-12 biosynthetic process
          innate immune response
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          response to copper ion
          negative regulation of inflammatory response
          cellular response to lipopolysaccharide
          cellular response to mechanical stimulus
          cellular response to nicotine
          cellular response to interleukin-1
          cellular response to interleukin-6
          cellular response to peptide hormone stimulus
          positive regulation of canonical Wnt signaling pathway
          positive regulation of hyaluronan biosynthetic process
          positive regulation of miRNA metabolic process
          regulatory region DNA binding
          transcription regulatory region sequence-specific DNA binding
          RNA polymerase II regulatory region sequence-specific DNA binding
          RNA polymerase II distal enhancer sequence-specific DNA binding
          RNA polymerase II transcription factor activity, sequence-specific DNA binding
          transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
          transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
          DNA binding
          chromatin binding
          double-stranded DNA binding
          transcription factor activity, sequence-specific DNA binding
          protein binding
          transcription factor binding
          heat shock protein binding
          protein homodimerization activity
          sequence-specific DNA binding
          transcription regulatory region DNA binding
          protein heterodimerization activity

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