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          • › Rn01399949_m1
          See other SSC5D GE Assays ›
          Gene Symbol:
          Ssc5d
          Gene Name:
          scavenger receptor cysteine rich family, 5 domains
          Gene Aliases:
          RGD1565772
          Chromosome Location:
          Chr.1: 72443756 - 72462293 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01399949_m1
          Best Coverage
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ssc5d
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001134545.1 NP_001128017.1 8 - 9 1502 73
          XM_006228257.1 XP_006228319.1 8 - 9 2248 73

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100008098.rn.1

          Set Membership:

          Amplicon length between 71 and 85 3' Most Recommended Assay Rattus norvegicus 1700 Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          receptor-mediated endocytosis
          defense response
          regulation of interleukin-8 production
          negative regulation of interleukin-8 production
          detection of bacterial lipoprotein
          defense response to Gram-negative bacterium
          defense response to Gram-positive bacterium
          fibronectin binding
          scavenger receptor activity
          laminin binding
          extracellular matrix binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P136571 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 263264 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 259840 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 543986 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 493387 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 68469 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 712463 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 840671 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 514570 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 83357 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 637331 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 472611 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 32278 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 261440 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 269758 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 871793 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 108704 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 105421 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P136571 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P136571 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P136571 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P456913 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10718840 - -
          Affymetrix Rat Gene 1.0 ST Array 10718843 - -
          Affymetrix Rat Gene 1.0 ST Array 10718845 - -
          Affymetrix Rat Gene 1.0 ST Array 10718849 - -
          Affymetrix Rat Gene 1.0 ST Array 10718836 - -
          Affymetrix Rat Gene 1.0 ST Array 10718841 - -
          Affymetrix Rat Gene 1.0 ST Array 10718846 - -
          Affymetrix Rat Gene 1.0 ST Array 10718850 - -
          Affymetrix Rat Gene 1.0 ST Array 10718838 - -
          Affymetrix Rat Gene 1.0 ST Array 10718851 - -
          Affymetrix Rat Gene 1.0 ST Array 10718842 - -
          Affymetrix Rat Gene 1.0 ST Array 10718839 - -
          Affymetrix Rat Gene 1.0 ST Array 10718844 - -
          Affymetrix Rat Gene 1.0 ST Array 10718847 - -
          Affymetrix Rat Gene 1.0 ST Array 10718848 - -
          Affymetrix Rat Gene 1.0 ST Array 10718837 - -
          Affymetrix Rat Gene 1.1 ST Array 10718835 - -
          Rat Genome 230 2.0 Array 1385282_at - -
          Rat Genome 230 2.0 Array 1376447_at - -
          Rat Genome 230 2.0 Array 1385282_PM_at - -
          Rat Genome 230 2.0 Array 1376447_PM_at - -
          Affymetrix HT Rat Focus Array 1376447_PM_at - -
          Affymetrix HT Rat Focus Array 1376447_at - -
          Affymetrix Rat Clariom S Assay PSR0100066268.rn.1 TC0100008098.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100066271.rn.1 TC0100008098.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100066272.rn.1 TC0100008098.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100066269.rn.1 TC0100008098.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100066267.rn.1 TC0100008098.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100066270.rn.1 TC0100008098.rn.1 RTA TC
          Rat Expression Set 230 1376447_PM_at - -
          Rat Expression Set 230 1376447_at - -
          Affymetrix Rat Gene 1.0 ST Array 10718835 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20938060 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1368006 - -

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          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0