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          • › Rn01401163_m1
          See other SMARCAL1 GE Assays ›
          Gene Symbol:
          Smarcal1
          Gene Name:
          Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.9: 79943757 - 79990230 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01401163_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Smarcal1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001108222.1 NP_001101692.1 9 - 10 1806 55
          XM_006245212.2 XP_006245274.1 10 - 11 2218 55
          XM_006245213.2 XP_006245275.1 10 - 11 1742 55
          XM_008767235.1 XP_008765457.1 10 - 11 1882 55
          XM_008767236.1 XP_008765458.1 10 - 11 2106 55
          XM_008767237.1 XP_008765459.1 10 - 11 1252 55
          GenBank mRNA BC168154.1 - 10 - 11 1820 55

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0900000870.rn.1

          Set Membership:

          Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          DNA metabolic process
          DNA repair
          chromatin organization
          regulation of transcription by RNA polymerase II
          cellular response to DNA damage stimulus
          biological_process
          replication fork processing
          molecular_function
          DNA binding
          helicase activity
          ATP binding
          ATP-dependent activity, acting on DNA
          ATP-dependent DNA/DNA annealing activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P328815 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P004550 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 261190 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 152127 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 857120 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 162960 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 887961 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 51005 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 65759 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 120169 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 440587 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 658083 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 510984 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 576828 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 146168 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 764130 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 385706 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 503336 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 79569 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 388931 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 793125 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 248363 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 802860 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 759160 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 121511 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 478257 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 226150 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 338224 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 108696 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 295949 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 360600 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 38014 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 715275 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 192806 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 408865 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 737510 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 578380 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 728662 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 112752 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 172419 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 62137 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 37073 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 180428 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P328815 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P004550 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P004550 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P328815 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P328815 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P004550 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P328815 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 89146 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10924209 - -
          Affymetrix Rat Gene 1.0 ST Array 10924212 - -
          Affymetrix Rat Gene 1.0 ST Array 10924203 - -
          Affymetrix Rat Gene 1.0 ST Array 10924202 - -
          Affymetrix Rat Gene 1.0 ST Array 10924204 - -
          Affymetrix Rat Gene 1.0 ST Array 10924215 - -
          Affymetrix Rat Gene 1.0 ST Array 10924214 - -
          Affymetrix Rat Gene 1.0 ST Array 10924200 - -
          Affymetrix Rat Gene 1.0 ST Array 10924207 - -
          Affymetrix Rat Gene 1.0 ST Array 10924211 - -
          Affymetrix Rat Gene 1.0 ST Array 10924201 - -
          Affymetrix Rat Gene 1.0 ST Array 10924208 - -
          Affymetrix Rat Gene 1.0 ST Array 10924216 - -
          Affymetrix Rat Gene 1.0 ST Array 10924206 - -
          Affymetrix Rat Gene 1.0 ST Array 10924205 - -
          Affymetrix Rat Gene 1.0 ST Array 10924210 - -
          Affymetrix Rat Gene 1.1 ST Array 10924199 - -
          Rat Genome 230 2.0 Array 1373706_at - -
          Rat Genome 230 2.0 Array 1373706_PM_at - -
          Affymetrix HT Rat Focus Array 1373706_at - -
          Affymetrix HT Rat Focus Array 1373706_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0900007127.rn.1 TC0900000870.rn.1 RTA TC
          Rat Expression Set 230 1373706_at - -
          Rat Expression Set 230 1373706_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10924199 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21383703 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1356620 - -

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          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
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