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          • Home
          • › Search Tool
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          • › Rn01423584_g1
          See other CD40 GE Assays ›
          Gene Symbol:
          Cd40
          Gene Name:
          CD40 molecule, TNF receptor superfamily member 5
          Gene Aliases:
          Tnfrsf5
          Chromosome Location:
          Chr.3: 161519788 - 161534943 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01423584_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Cd40
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_134360.1 NP_599187.1 2 - 3 154 55
          XM_006235511.2 XP_006235573.1 2 - 3 216 55
          XM_008762463.1 XP_008760685.1 2 - 3 217 55
          XM_008762464.1 XP_008760686.1 2 - 3 215 55
          XM_008762465.1 XP_008760687.1 2 - 3 216 55
          GenBank mRNA AF241231.2 - 2 - 3 169 55
          BC097949.1 - 2 - 3 154 55
          FQ226992.1 - 2 - 3 137 55

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0300002314.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Detect Genomic DNA Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Cd40

          Gene Ontology Categories:

          Function(s) Process(es)

          positive regulation of protein phosphorylation
          immune system process
          regulation of immunoglobulin production
          immune response-regulating cell surface receptor signaling pathway
          cellular calcium ion homeostasis
          inflammatory response
          positive regulation of B cell proliferation
          positive regulation of interleukin-12 production
          B cell activation
          positive regulation of tyrosine phosphorylation of STAT protein
          positive regulation of I-kappaB kinase/NF-kappaB signaling
          positive regulation of MAP kinase activity
          protein kinase B signaling
          positive regulation of transcription by RNA polymerase II
          positive regulation of isotype switching to IgG isotypes
          regulation of immune response
          positive regulation of NF-kappaB transcription factor activity
          defense response to virus
          cellular response to lipopolysaccharide
          cellular response to mechanical stimulus
          positive regulation of protein kinase C signaling
          positive regulation of endothelial cell apoptotic process
          antigen binding
          protein binding
          enzyme binding
          ubiquitin protein ligase binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR0300017328.rn.1 TC0300002314.rn.1 RTA TC

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