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- Gene Symbol:
-
Traf3 - Gene Name:
- Tnf receptor-associated factor 3
- Gene Aliases:
- -
- Chromosome Location:
- Chr.6: 135610698 - 135720247 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Traf3 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001108724.1 | NP_001102194.1 | 9 - 10 | 1053 | 64 | |
| XM_006240596.2 | XP_006240658.1 | 9 - 10 | 1098 | 64 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0600001586.rn.1Set Membership: |
Amplicon length less than or equal to 70
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
regulation of cytokine production
toll-like receptor signaling pathway
Toll signaling pathway
biological_process
protein ubiquitination
regulation of proteolysis
negative regulation of NF-kappaB transcription factor activity
regulation of interferon-beta production
tumor necrosis factor-mediated signaling pathway
regulation of apoptotic process
innate immune response
regulation of defense response to virus
molecular_function
ubiquitin-protein transferase activity
tumor necrosis factor receptor binding
zinc ion binding
protein kinase binding
ubiquitin protein ligase binding
thioesterase binding
regulation of cytokine production
toll-like receptor signaling pathway
Toll signaling pathway
biological_process
protein ubiquitination
regulation of proteolysis
negative regulation of NF-kappaB transcription factor activity
regulation of interferon-beta production
tumor necrosis factor-mediated signaling pathway
regulation of apoptotic process
innate immune response
regulation of defense response to virus
molecular_function
ubiquitin-protein transferase activity
tumor necrosis factor receptor binding
zinc ion binding
protein kinase binding
ubiquitin protein ligase binding
thioesterase binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P335636 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P111337 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 949338 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 287625 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 888669 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 720164 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 524415 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 59620 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 201393 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 384085 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 720972 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 336474 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 242471 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 294487 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 722767 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 201091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 544889 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 882945 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 417038 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 705811 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 311984 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 451468 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 358084 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583202 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 451181 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 537549 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 806330 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 384441 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 767773 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 11161 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 873173 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 525206 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 407641 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 843157 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 471947 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 499010 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 883843 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 773710 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 535364 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 247115 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 93248 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 340529 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 472617 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 454450 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 531835 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 259066 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 613669 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 539558 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402006 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 854713 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 217574 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 661698 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 246609 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 654114 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 719119 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 310317 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 883796 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 469927 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 78121 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 692839 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 578958 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 884558 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 399362 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 887368 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 279620 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 836617 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 306633 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 492640 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 604407 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 23266 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 628309 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 432577 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 180118 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 256400 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 411392 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 239716 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 125990 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 27245 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 68256 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 30171 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 145274 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 48557 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 91044 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 84642 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 150966 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 6872 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 72383 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 27592 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P111337 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P335636 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P335636 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P111337 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P335636 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P111337 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P335636 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 84796 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 40440 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 56818 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 19541 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 96070 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10887271 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887274 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887279 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887276 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887280 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887278 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887277 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887272 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887273 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887275 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10887270 | - | - |
| Rat Genome 230 2.0 Array | 1395434_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1373482_at | - | - |
| Rat Genome 230 2.0 Array | 1373482_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1395434_at | - | - |
| Affymetrix HT Rat Focus Array | 1395434_at | - | - |
| Affymetrix HT Rat Focus Array | 1395434_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0600011033.rn.1 | TC0600001586.rn.1 | RTA TC |
| Rat Expression Set 230 | 1373482_PM_at | - | - |
| Rat Expression Set 230 | 1373482_at | - | - |
| Rat Expression Set 230 | 1395434_PM_at | - | - |
| Rat Expression Set 230 | 1395434_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10887270 | - | - |
| Rat Genome U34 Set | rc_AA965179_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21715280 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1353682 | - | - |
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