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          • › Rn01433624_m1
          See other NODAL GE Assays ›
          Gene Symbol:
          Nodal
          Gene Name:
          nodal growth differentiation factor
          Gene Aliases:
          -
          Chromosome Location:
          Chr.20: 31035729 - 31044096 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01433624_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Nodal
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001106394.1 NP_001099864.1 2 - 3 1199 109

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC2000000680.rn.1

          Set Membership:

          Amplicon length greater than or equal to 101 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          in utero embryonic development
          gastrulation with mouth forming second
          mesoderm formation
          trophectodermal cell differentiation
          trophectodermal cellular morphogenesis
          neural fold formation
          liver development
          placenta development
          embryonic placenta development
          maternal placenta development
          vasculature development
          heart looping
          inhibition of neuroepithelial cell differentiation
          determination of left/right symmetry
          gastrulation
          nervous system development
          brain development
          endoderm development
          heart development
          positive regulation of cell population proliferation
          embryonic pattern specification
          anterior/posterior axis specification
          anterior/posterior pattern specification
          regulation of signal transduction
          polarity specification of proximal/distal axis
          regulation of gastrulation
          positive regulation of vascular endothelial growth factor production
          negative regulation of cell development
          positive regulation of pathway-restricted SMAD protein phosphorylation
          cell migration
          stem cell population maintenance
          positive regulation of cell-cell adhesion
          lung development
          positive regulation of activin receptor signaling pathway
          floor plate morphogenesis
          embryonic heart tube development
          endodermal cell differentiation
          nodal signaling pathway
          growth
          cell migration involved in gastrulation
          regulation of apoptotic process
          positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
          regulation of MAPK cascade
          cell fate commitment
          negative regulation of cell differentiation
          positive regulation of angiogenesis
          positive regulation of transcription by RNA polymerase II
          axial mesodermal cell fate specification
          mesendoderm development
          cell development
          digestive tract morphogenesis
          anatomical structure formation involved in morphogenesis
          embryonic cranial skeleton morphogenesis
          tissue morphogenesis
          formation of anatomical boundary
          positive regulation of epithelial cell proliferation
          positive regulation of DNA-binding transcription factor activity
          digestive system development
          embryonic process involved in female pregnancy
          maternal process involved in parturition
          positive regulation of SMAD protein signal transduction
          SMAD protein signal transduction
          left lung morphogenesis
          negative regulation of androgen receptor signaling pathway
          epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification
          positive regulation of ERK1 and ERK2 cascade
          primitive streak formation
          transforming growth factor beta receptor signaling pathway involved in primitive streak formation
          nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry
          negative regulation of trophoblast cell migration
          negative regulation of chorionic trophoblast cell proliferation
          positive regulation of signaling receptor activity
          cytokine activity
          transforming growth factor beta receptor binding
          growth factor activity
          receptor ligand activity
          type I activin receptor binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P137941 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 571098 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 954765 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 918318 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 237848 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 865501 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 347556 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 310806 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 134466 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P137941 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P137941 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P137941 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P330890 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 22340 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10830077 - -
          Affymetrix Rat Gene 1.0 ST Array 10830078 - -
          Affymetrix Rat Gene 1.0 ST Array 10830076 - -
          Affymetrix Rat Gene 1.1 ST Array 10830075 - -
          Affymetrix Rat Clariom S Assay PSR2000005971.rn.1 TC2000000680.rn.1 RTA TC
          Affymetrix Rat Gene 1.0 ST Array 10830075 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21472990 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1351532 - -
          Illumina ratRef-12 v1.0 expression beadchip ILMN_2039804 - -

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          Host server : magellan-search-784b477dbd-pq4vn:80/100.66.130.62:80.
          git-commit: d41a97e986437cfbf980934f14197a4b4d3eb741
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