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          • › Rn01435095_m1
          See other TFAP2A GE Assays ›
          Gene Symbol:
          Tfap2a
          Gene Name:
          transcription factor AP-2 alpha
          Gene Aliases:
          Tcfap2a
          Chromosome Location:
          Chr.17: 24647833 - 24670457 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01435095_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Tfap2a
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001107345.1 NP_001100815.1 4 - 5 1034 75
          XM_008771570.1 XP_008769792.1 4 - 5 771 75

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1700000412.rn.1

          Set Membership:

          Amplicon length between 71 and 85 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription by RNA polymerase II
          kidney development
          neural tube closure
          lens morphogenesis in camera-type eye
          outflow tract morphogenesis
          keratinocyte development
          optic vesicle morphogenesis
          optic cup structural organization
          regulation of transcription, DNA-templated
          regulation of transcription by RNA polymerase II
          transcription by RNA polymerase II
          sensory perception of sound
          negative regulation of cell population proliferation
          response to water deprivation
          embryonic pattern specification
          response to organic substance
          embryonic body morphogenesis
          positive regulation of gene expression
          retina layer formation
          negative regulation of transcription by competitive promoter binding
          neural crest cell development
          Schwann cell development
          anterior neuropore closure
          trigeminal nerve development
          oculomotor nerve formation
          forebrain neuron development
          positive regulation of cell migration
          positive regulation of bone mineralization
          response to lipopolysaccharide
          embryonic forelimb morphogenesis
          forelimb morphogenesis
          negative regulation of epidermal growth factor receptor signaling pathway
          regulation of cell population proliferation
          inner ear morphogenesis
          negative regulation of apoptotic process
          negative regulation of neuron apoptotic process
          positive regulation of neuron apoptotic process
          skin development
          regulation of cell differentiation
          regulation of neuron differentiation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          sympathetic nervous system development
          embryonic camera-type eye morphogenesis
          embryonic cranial skeleton morphogenesis
          skeletal system morphogenesis
          epidermis morphogenesis
          roof of mouth development
          lens induction in camera-type eye
          face morphogenesis
          bone morphogenesis
          eyelid development in camera-type eye
          cornea development in camera-type eye
          positive regulation of tooth mineralization
          cellular response to iron ion
          basement membrane organization
          metanephric nephron development
          negative regulation of reactive oxygen species metabolic process
          transcription cis-regulatory region binding
          RNA polymerase II transcription regulatory region sequence-specific DNA binding
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          RNA polymerase II core promoter sequence-specific DNA binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          cis-regulatory region sequence-specific DNA binding
          DNA-binding transcription activator activity, RNA polymerase II-specific
          chromatin binding
          DNA-binding transcription factor activity
          transcription coactivator activity
          transcription corepressor activity
          protein binding
          transcription factor binding
          sequence-specific DNA binding
          protein dimerization activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P155483 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 72112 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 292406 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 259426 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 184217 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 356049 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 731501 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 835031 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 971055 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 302911 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 700621 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 168087 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 18331 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 156524 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P155483 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P155483 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P155483 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P480249 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10794652 - -
          Affymetrix Rat Gene 1.0 ST Array 10794651 - -
          Affymetrix Rat Gene 1.0 ST Array 10794654 - -
          Affymetrix Rat Gene 1.0 ST Array 10794657 - -
          Affymetrix Rat Gene 1.0 ST Array 10794656 - -
          Affymetrix Rat Gene 1.0 ST Array 10794650 - -
          Affymetrix Rat Gene 1.0 ST Array 10794653 - -
          Affymetrix Rat Gene 1.1 ST Array 10794649 - -
          Rat Genome 230 2.0 Array 1390842_at - -
          Rat Genome 230 2.0 Array 1390842_PM_at - -
          Affymetrix HT Rat Focus Array 1390842_at - -
          Affymetrix HT Rat Focus Array 1390842_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1700003027.rn.1 TC1700000412.rn.1 RTA TC
          Rat Expression Set 230 1390842_at - -
          Rat Expression Set 230 1390842_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10794649 - -
          Rat Genome U34 Set rc_AI058340_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21336832 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1356465 - -

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