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          • › Rn01449962_m1
          See other PKD2 GE Assays ›
          Gene Symbol:
          Pkd2
          Gene Name:
          polycystic kidney disease 2 (autosomal dominant)
          Gene Aliases:
          RGD1559992
          Chromosome Location:
          Chr.14: 6602004 - 6645257 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01449962_m1
          Best Coverage
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          Availability Inventoried
          Catalog # 4331182
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Pkd2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001191934.1 NP_001178863.1 13 - 14 2513 169

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1400001319.rn.1

          Set Membership:

          Amplicon length greater than or equal to 101 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          branching involved in ureteric bud morphogenesis
          kidney development
          liver development
          embryonic placenta development
          heart looping
          detection of nodal flow
          calcium ion transport
          cellular calcium ion homeostasis
          positive regulation of cytosolic calcium ion concentration
          receptor signaling pathway via JAK-STAT
          determination of left/right symmetry
          heart development
          positive regulation of gene expression
          spinal cord development
          neural tube development
          positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity
          metanephric part of ureteric bud development
          sodium ion transmembrane transport
          aorta development
          regulation of cell population proliferation
          cytoplasmic sequestering of transcription factor
          positive regulation of nitric oxide biosynthetic process
          positive regulation of transcription by RNA polymerase II
          detection of mechanical stimulus
          release of sequestered calcium ion into cytosol
          transmembrane transport
          negative regulation of ryanodine-sensitive calcium-release channel activity
          placenta blood vessel development
          renal tubule morphogenesis
          renal artery morphogenesis
          calcium ion transmembrane transport
          cellular response to hydrostatic pressure
          cellular response to osmotic stress
          cellular response to fluid shear stress
          potassium ion transmembrane transport
          determination of liver left/right asymmetry
          renal system development
          metanephric mesenchyme development
          mesonephric tubule development
          mesonephric duct development
          metanephric smooth muscle tissue development
          metanephric cortex development
          metanephric ascending thin limb development
          metanephric cortical collecting duct development
          metanephric distal tubule development
          metanephric S-shaped body morphogenesis
          regulation of calcium ion import
          negative regulation of G1/S transition of mitotic cell cycle
          signaling receptor binding
          voltage-gated ion channel activity
          voltage-gated calcium channel activity
          voltage-gated sodium channel activity
          calcium channel activity
          potassium channel activity
          calcium ion binding
          cytoskeletal protein binding
          channel activity
          voltage-gated cation channel activity
          identical protein binding
          protein homodimerization activity
          actinin binding
          HLH domain binding
          transmembrane transporter binding
          calcium-induced calcium release activity
          ATPase binding
          phosphoprotein binding
          muscle alpha-actinin binding
          alpha-actinin binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P085715 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P085715 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P085715 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P085715 - -
          Array Name Probe IDs Targets Target Type
          Rat Genome 230 2.0 Array 1379209_PM_at - -
          Rat Genome 230 2.0 Array 1379209_at - -
          Affymetrix HT Rat Focus Array 1382021_at - -
          Affymetrix HT Rat Focus Array 1382021_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1400009868.rn.1 TC1400001319.rn.1 RTA TC
          Rat Expression Set 230 1379209_PM_at - -
          Rat Expression Set 230 1379209_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22318345 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1372138 - -
          RatRef-12 Expression BeadChip ILMN_48305 - -

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          Host server : magellan-search-74594944d-pk6zc:80/100.66.130.62:80.
          git-commit: ab2b2261c2971e97b1ae408e3ad10520b8413932
          git-url: https://github.com/thermofisher/magellan-search
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