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          • Home
          • › Search Tool
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          • › Rn01450612_s1
          See other SOX4 GE Assays ›
          Gene Symbol:
          Sox4
          Gene Name:
          SRY (sex determining region Y)-box 4
          Gene Aliases:
          -
          Chromosome Location:
          Chr.17: 37615022 - 37619728 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01450612_s1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Sox4
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001271205.1 NP_001258134.1 1 1877 63

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          More Information


          Additional Information:

          Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

          Set Membership:

          Amplicon length less than or equal to 70 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Both primers and probe map within a single exon

          Gene Ontology Categories:

          Function(s) Process(es)

          skeletal system development
          response to hypoxia
          neural tube formation
          pro-B cell differentiation
          mitral valve morphogenesis
          cardiac ventricle formation
          cardiac right ventricle morphogenesis
          atrial septum primum morphogenesis
          noradrenergic neuron differentiation
          regulation of transcription, DNA-templated
          transcription by RNA polymerase II
          DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
          heart development
          positive regulation of cell population proliferation
          negative regulation of cell population proliferation
          glial cell proliferation
          spinal cord development
          spinal cord motor neuron differentiation
          glial cell development
          positive regulation of Wnt signaling pathway
          T cell differentiation
          endocrine pancreas development
          negative regulation of protein ubiquitination
          regulation of protein stability
          positive regulation of insulin secretion
          somatic stem cell population maintenance
          ascending aorta morphogenesis
          glucose homeostasis
          DNA damage response, detection of DNA damage
          positive regulation of apoptotic process
          positive regulation of translation
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          negative regulation of protein export from nucleus
          sympathetic nervous system development
          protein stabilization
          canonical Wnt signaling pathway
          limb bud formation
          ventricular septum morphogenesis
          negative regulation of cell death
          neuroepithelial cell differentiation
          kidney morphogenesis
          cellular response to glucose stimulus
          positive regulation of canonical Wnt signaling pathway
          positive regulation of N-terminal peptidyl-lysine acetylation
          transcription cis-regulatory region binding
          DNA-binding transcription factor activity, RNA polymerase II-specific
          core promoter sequence-specific DNA binding
          DNA-binding transcription factor activity
          transcription coactivator activity
          protein heterodimerization activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P050650 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P050650 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P050650 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P050650 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P16820 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1071095 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P382226 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10794968 - -
          Affymetrix Rat Gene 1.1 ST Array 10794967 - -
          Rat Genome 230 2.0 Array 1373860_PM_at - -
          Rat Genome 230 2.0 Array 1375123_at - -
          Rat Genome 230 2.0 Array 1384000_PM_at - -
          Rat Genome 230 2.0 Array 1383137_PM_at - -
          Rat Genome 230 2.0 Array 1375123_PM_at - -
          Rat Genome 230 2.0 Array 1384000_at - -
          Rat Genome 230 2.0 Array 1393571_at - -
          Rat Genome 230 2.0 Array 1383989_PM_at - -
          Rat Genome 230 2.0 Array 1393571_PM_at - -
          Rat Genome 230 2.0 Array 1375257_PM_at - -
          Rat Genome 230 2.0 Array 1373860_at - -
          Rat Genome 230 2.0 Array 1375257_at - -
          Rat Genome 230 2.0 Array 1383989_at - -
          Rat Genome 230 2.0 Array 1383137_at - -
          Affymetrix HT Rat Focus Array 1384000_at - -
          Affymetrix HT Rat Focus Array 1375123_at - -
          Affymetrix HT Rat Focus Array 1384000_PM_at - -
          Affymetrix HT Rat Focus Array 1375123_PM_at - -
          Affymetrix HT Rat Focus Array 1383989_at - -
          Affymetrix HT Rat Focus Array 1375257_PM_at - -
          Affymetrix HT Rat Focus Array 1375257_at - -
          Affymetrix HT Rat Focus Array 1373860_at - -
          Affymetrix HT Rat Focus Array 1373860_PM_at - -
          Affymetrix HT Rat Focus Array 1383989_PM_at - -
          Rat Expression Set 230 1375123_PM_at - -
          Rat Expression Set 230 1375123_at - -
          Rat Expression Set 230 1373860_at - -
          Rat Expression Set 230 1375257_PM_at - -
          Rat Expression Set 230 1373860_PM_at - -
          Rat Expression Set 230 1375257_at - -
          Rat Expression Set 230 1383989_at - -
          Rat Expression Set 230 1384000_PM_at - -
          Rat Expression Set 230 1383137_at - -
          Rat Expression Set 230 1383989_PM_at - -
          Rat Expression Set 230 1384000_at - -
          Rat Expression Set 230 1383137_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10794967 - -
          Rat Genome U34 Set rc_AI013050_at - -
          Rat Genome U34 Set rc_AI030701_at - -
          Rat Genome U34 Set rc_AA956294_at - -
          Rat Genome U34 Set rc_AA963158_at - -
          Rat Genome U34 Set rc_AA819698_at - -
          Rat Genome U34 Set rc_AI229616_at - -
          Rat Genome U34 Set rc_AI137787_at - -
          Rat Genome U34 Set rc_AI137765_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21746623 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1350349 - -
          RatRef-12 Expression BeadChip ILMN_58704 - -

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          Host server : magellan-search-7f7867b7b4-2bfff:80/100.66.130.62:80.
          git-commit: 01fb56a08528fd72f4925b2983aa4df42f9d7994
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