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          • › Search Tool
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          • › Rn01457724_m1
          See other BCKDHA GE Assays ›
          Gene Symbol:
          Bckdha
          Gene Name:
          branched chain ketoacid dehydrogenase E1, alpha polypeptide
          Gene Aliases:
          BCKDA, E1a
          Chromosome Location:
          Chr.1: 82423291 - 82452057 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01457724_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Bckdha
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_012782.1 NP_036914.1 5 - 6 653 94
          GenBank mRNA BC089915.1 - 3 - 4 300 94
          BC161819.1 - 5 - 6 658 94
          J02827.1 - 5 - 6 637 94

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100005001.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Bckdha

          Gene Ontology Categories:

          Function(s) Process(es)

          response to nutrient
          branched-chain amino acid catabolic process
          response to glucocorticoid
          response to cAMP
          3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
          oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
          protein-containing complex binding
          metal ion binding
          2-oxoisovalerate dehydrogenase (acylating) activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P15665 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 121102 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 519228 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 456180 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 583775 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 639025 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 168531 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 691276 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 459515 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 591506 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 258535 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 415469 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 788842 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 832236 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 776300 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 349247 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 628281 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 634502 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 869814 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 403957 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 171265 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 59864 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 44932 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15665 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15665 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P15665 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P15665 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700251752 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 68172 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 64151 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 94975 - -
          Agilent Rat cDNA Microarray (G4105A) 700251752 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10719869 - -
          Affymetrix Rat Gene 1.0 ST Array 10719866 - -
          Affymetrix Rat Gene 1.0 ST Array 10719865 - -
          Affymetrix Rat Gene 1.0 ST Array 10719867 - -
          Affymetrix Rat Gene 1.0 ST Array 10719871 - -
          Affymetrix Rat Gene 1.0 ST Array 10719870 - -
          Affymetrix Rat Gene 1.0 ST Array 10719872 - -
          Affymetrix Rat Gene 1.0 ST Array 10719864 - -
          Affymetrix Rat Gene 1.0 ST Array 10719868 - -
          Affymetrix Rat Gene 1.1 ST Array 10719863 - -
          Rat Genome 230 2.0 Array 1380557_at - -
          Rat Genome 230 2.0 Array 1380557_PM_at - -
          Rat Genome 230 2.0 Array 1382828_PM_at - -
          Rat Genome 230 2.0 Array 1382828_at - -
          Rat Genome 230 2.0 Array 1370897_at - -
          Rat Genome 230 2.0 Array 1370897_PM_at - -
          Affymetrix HT Rat Focus Array 1380557_PM_at - -
          Affymetrix HT Rat Focus Array 1370897_PM_at - -
          Affymetrix HT Rat Focus Array 1370897_at - -
          Affymetrix HT Rat Focus Array 1380557_at - -
          Affymetrix Rat Clariom S Assay PSR0100039707.rn.1 TC0100005001.rn.1 RTA TC
          Rat Expression Set 230 1370897_PM_at - -
          Rat Expression Set 230 1370897_at - -
          Rat Expression Set 230 1380557_at - -
          Rat Expression Set 230 1382828_PM_at - -
          Rat Expression Set 230 1382828_at - -
          Rat Expression Set 230 1380557_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10719863 - -
          Rat Genome U34 Set J02827_g_at - -
          Rat Genome U34 Set J02827_at - -
          Rat Genome U34 Set rc_AA851950_at - -
          Rat Genome U34 Set rc_AI145529_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21558354 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1371691 - -

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          Host server : magellan-search-6659c69d8f-ztd5s:80/100.66.134.6:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
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