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          • Home
          • › Search Tool
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          • › Rn01467901_m1
          See other IRG1 GE Assays ›
          Gene Symbol:
          Irg1
          Gene Name:
          immunoresponsive gene 1
          Gene Aliases:
          RGD1563454
          Chromosome Location:
          Chr.15: 93612968 - 93622185 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01467901_m1
          Best Coverage
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Irg1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001107282.1 NP_001100752.1 4 - 5 573 57
          XM_006252440.2 XP_006252502.1 2 - 3 409 57

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1500001060.rn.1

          Set Membership:

          Amplicon length less than or equal to 70 3' Most Recommended Assay Rattus norvegicus 1700 Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          positive regulation of antimicrobial humoral response
          defense response
          embryo implantation
          metabolic process
          propionate catabolic process
          negative regulation of NF-kappaB transcription factor activity
          negative regulation of type I interferon production
          response to lipopolysaccharide
          negative regulation of toll-like receptor 2 signaling pathway
          negative regulation of toll-like receptor 4 signaling pathway
          cellular response to interferon-beta
          negative regulation of innate immune response
          negative regulation of inflammatory response
          cellular response to molecule of bacterial origin
          cellular response to lipopolysaccharide
          cellular response to interferon-gamma
          cellular response to interleukin-1
          cellular response to tumor necrosis factor
          cellular response to progesterone stimulus
          tolerance induction to lipopolysaccharide
          positive regulation of reactive oxygen species metabolic process
          2-methylcitrate dehydratase activity
          aconitate decarboxylase activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P028190 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 159692 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 590426 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 918217 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 537102 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 727476 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 34914 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P028190 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P028190 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P028190 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P433668 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10781880 - -
          Affymetrix Rat Gene 1.0 ST Array 10781879 - -
          Affymetrix Rat Gene 1.0 ST Array 10781881 - -
          Affymetrix Rat Gene 1.0 ST Array 10781878 - -
          Affymetrix Rat Gene 1.1 ST Array 10781877 - -
          Affymetrix Rat Clariom S Assay PSR1500006983.rn.1 TC1500001060.rn.1 RTA TC
          Affymetrix Rat Gene 1.0 ST Array 10781877 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21789827 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1649811 - -

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