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          • › Search Tool
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          • › Rn01477493_g1
          See other MESP1 GE Assays ›
          Gene Symbol:
          Mesp1
          Gene Name:
          mesoderm posterior basic helix-loop-helix transcription factor 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.1: 141532390 - 141533908 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01477493_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Mesp1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001107531.1 NP_001101001.1 1 - 2 928 73

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100005852.rn.1

          Set Membership:

          Amplicon length between 71 and 85 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          heart looping
          heart morphogenesis
          secondary heart field specification
          embryonic heart tube morphogenesis
          cardiac atrium formation
          cardiac ventricle formation
          sinus venosus morphogenesis
          growth involved in heart morphogenesis
          cardioblast anterior-lateral migration
          cardioblast migration
          transcription by RNA polymerase II
          gastrulation
          mesodermal cell migration
          neurogenesis
          signal transduction involved in regulation of gene expression
          positive regulation of Notch signaling pathway involved in heart induction
          negative regulation of mesodermal cell fate specification
          negative regulation of endodermal cell fate specification
          endothelial cell differentiation
          positive regulation of Notch signaling pathway
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription by RNA polymerase II
          lateral mesoderm development
          positive regulation of striated muscle cell differentiation
          cardiac muscle cell differentiation
          cardiac cell fate determination
          sinoatrial node cell differentiation
          cardiac vascular smooth muscle cell differentiation
          cardioblast migration to the midline involved in heart field formation
          positive regulation of hepatocyte differentiation
          positive regulation of heart induction by negative regulation of canonical Wnt signaling pathway
          transcription cis-regulatory region binding
          RNA polymerase II cis-regulatory region sequence-specific DNA binding
          cis-regulatory region sequence-specific DNA binding
          DNA-binding transcription factor activity
          protein dimerization activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P045122 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 700675 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P045122 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P045122 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P045122 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P522779 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P22641 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10722990 - -
          Affymetrix Rat Gene 1.0 ST Array 10722991 - -
          Affymetrix Rat Gene 1.1 ST Array 10722989 - -
          Rat Genome 230 2.0 Array 1393741_PM_at - -
          Rat Genome 230 2.0 Array 1393741_at - -
          Affymetrix HT Rat Focus Array 1393741_PM_at - -
          Affymetrix HT Rat Focus Array 1393741_at - -
          Affymetrix Rat Clariom S Assay PSR0100046595.rn.1 TC0100005852.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100046596.rn.1 TC0100005852.rn.1 RTA TC
          Rat Expression Set 230 1393741_PM_at - -
          Rat Expression Set 230 1393741_at - -
          Affymetrix Rat Gene 1.0 ST Array 10722989 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21780773 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1371409 - -

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          Host server : magellan-search-65cb46898d-nlgdw:80/100.66.128.131:80.
          git-commit: e5493f66f4597fc66e516c8a379ca3b6bed48f5b
          git-url: https://github.com/thermofisher/magellan-search
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