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          • Home
          • › Search Tool
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          • › Rn01486634_m1
          See other MMP1 GE Assays ›
          Gene Symbol:
          Mmp1
          Gene Name:
          matrix metallopeptidase 1 (interstitial collagenase)
          Gene Aliases:
          Mmp1a
          Chromosome Location:
          Chr.8: 5703206 - 5723593 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01486634_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Mmp1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001134530.1 NP_001128002.1 7 - 8 1062 88
          GenBank mRNA BC169019.1 - 7 - 8 1062 88

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0800000044.rn.1

          Set Membership:

          Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          luteinization
          luteolysis
          proteolysis
          response to xenobiotic stimulus
          response to mechanical stimulus
          positive regulation of fibroblast migration
          response to inactivity
          positive regulation of smooth muscle cell migration
          positive regulation of protein oligomerization
          cellular response to lipopolysaccharide
          cellular response to iron(III) ion
          cellular response to vitamin D
          cellular response to alkaloid
          cellular response to interleukin-1
          cellular response to tumor necrosis factor
          cellular response to peptide hormone stimulus
          cellular response to organic cyclic compound
          cellular response to xenobiotic stimulus
          cellular response to fluid shear stress
          response to indole-3-methanol
          endopeptidase activity
          metalloendopeptidase activity
          calcium ion binding
          protein binding
          peptidase activity
          zinc ion binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P111739 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 563772 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 256960 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 350290 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 856883 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 473901 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 418341 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 240950 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 443047 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 402862 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 562486 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 441929 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 816815 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 292773 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 151276 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 117788 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P111739 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P111739 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P111739 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P387222 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10907894 - -
          Affymetrix Rat Gene 1.0 ST Array 10907896 - -
          Affymetrix Rat Gene 1.0 ST Array 10907898 - -
          Affymetrix Rat Gene 1.0 ST Array 10907903 - -
          Affymetrix Rat Gene 1.0 ST Array 10907902 - -
          Affymetrix Rat Gene 1.0 ST Array 10907899 - -
          Affymetrix Rat Gene 1.0 ST Array 10907901 - -
          Affymetrix Rat Gene 1.0 ST Array 10907900 - -
          Affymetrix Rat Gene 1.0 ST Array 10907897 - -
          Affymetrix Rat Gene 1.0 ST Array 10907895 - -
          Affymetrix Rat Gene 1.1 ST Array 10907893 - -
          Rat Genome 230 2.0 Array 1373645_at - -
          Rat Genome 230 2.0 Array 1373645_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0800000251.rn.1 TC0800000044.rn.1 RTA TC
          Affymetrix Rat Gene 1.0 ST Array 10907893 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21450090 - -
          ABI Rat Genome Survey Microarray 22354653 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1361154 - -

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          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
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