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          • Home
          • › Search Tool
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          • › Rn01490608_m1
          See other CHI3L1 GE Assays ›
          Gene Symbol:
          Chi3l1
          Gene Name:
          chitinase 3-like 1 (cartilage glycoprotein-39)
          Gene Aliases:
          Chil1
          Chromosome Location:
          Chr.13: 51022826 - 51030797 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01490608_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Chi3l1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_053560.1 NP_446012.1 6 - 7 637 107
          XM_006249892.2 XP_006249954.2 6 - 7 691 107
          XM_008769574.1 XP_008767796.1 6 - 7 658 107
          GenBank mRNA AF062038.1 - 4 - 5 518 107
          BC091365.1 - 6 - 7 637 107
          EF467168.1 - 4 - 5 518 107
          FQ232458.1 - 3 - 4 303 107

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1300000303.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Chi3l1

          Gene Ontology Categories:

          Function(s) Process(es)

          carbohydrate metabolic process
          chitin catabolic process
          apoptotic process
          inflammatory response
          immune response
          activation of NF-kappaB-inducing kinase activity
          response to mechanical stimulus
          positive regulation of peptidyl-threonine phosphorylation
          lung development
          interleukin-8 production
          response to tumor necrosis factor
          positive regulation of angiogenesis
          positive regulation of protein kinase B signaling
          positive regulation of ERK1 and ERK2 cascade
          response to interleukin-1
          response to interleukin-6
          cellular response to interleukin-1
          cellular response to tumor necrosis factor
          molecular_function
          chitinase activity
          chitin binding
          carbohydrate binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P452176 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 631270 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 60334 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 921217 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 952695 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 694783 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 941449 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 343882 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 36376 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P452176 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P452176 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P452176 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P452176 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 701440290 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 56348 - -
          Agilent Rat cDNA Microarray (G4105A) 701440290 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10764077 - -
          Affymetrix Rat Gene 1.0 ST Array 10764076 - -
          Affymetrix Rat Gene 1.0 ST Array 10764074 - -
          Affymetrix Rat Gene 1.0 ST Array 10764078 - -
          Affymetrix Rat Gene 1.0 ST Array 10764071 - -
          Affymetrix Rat Gene 1.0 ST Array 10764073 - -
          Affymetrix Rat Gene 1.0 ST Array 10764075 - -
          Affymetrix Rat Gene 1.0 ST Array 10764070 - -
          Affymetrix Rat Gene 1.0 ST Array 10764072 - -
          Affymetrix Rat Gene 1.1 ST Array 10764069 - -
          Rat Genome 230 2.0 Array 1392171_PM_at - -
          Rat Genome 230 2.0 Array 1392171_at - -
          Affymetrix HT Rat Focus Array 1392171_at - -
          Affymetrix HT Rat Focus Array 1392171_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1300001922.rn.1 TC1300000303.rn.1 RTA TC
          Rat Expression Set 230 1392171_PM_at - -
          Rat Expression Set 230 1392171_at - -
          Affymetrix Rat Gene 1.0 ST Array 10764069 - -
          Rat Genome U34 Set rc_AA945643_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22221549 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1359657 - -

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