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          • Home
          • › Search Tool
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          • › Rn01517104_m1
          See other CIPC GE Assays ›
          Gene Symbol:
          Cipc
          Gene Name:
          CLOCK-interacting pacemaker
          Gene Aliases:
          RGD1309492
          Chromosome Location:
          Chr.6: 110968052 - 110990912 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01517104_m1
          Best Coverage
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Cipc
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001108044.2 NP_001101514.2 3 - 4 519 64
          XM_006240377.2 XP_006240439.1 3 - 4 445 64
          XM_006240378.2 XP_006240440.1 3 - 4 1158 64
          XM_006240380.2 XP_006240442.1 3 - 4 581 64
          XM_008764796.1 XP_008763018.1 4 - 5 698 64

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0600001228.rn.1

          Set Membership:

          Amplicon length less than or equal to 70 3' Most Recommended Assay Rattus norvegicus 1700 Probe spans exons

          Gene Ontology Categories:

          Function(s)

          negative regulation of circadian rhythm
          negative regulation of transcription, DNA-templated

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_42_P505320 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P039792 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 311228 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 903888 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 282819 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 447554 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 243951 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 560958 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 374198 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 834024 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 65518 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 195108 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 314683 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 268333 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 886072 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 557575 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 788496 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 45425 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 100017 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P039792 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P505320 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_42_P505320 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P039792 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P039792 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_42_P505320 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P324013 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 69050 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10886160 - -
          Affymetrix Rat Gene 1.0 ST Array 10886159 - -
          Affymetrix Rat Gene 1.0 ST Array 10886161 - -
          Affymetrix Rat Gene 1.1 ST Array 10886157 - -
          Rat Genome 230 2.0 Array 1374568_at - -
          Rat Genome 230 2.0 Array 1374568_PM_at - -
          Affymetrix HT Rat Focus Array 1374568_PM_at - -
          Affymetrix HT Rat Focus Array 1374568_at - -
          Affymetrix Rat Clariom S Assay PSR0600008726.rn.1 TC0600001228.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600008727.rn.1 TC0600001228.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0600008728.rn.1 TC0600001228.rn.1 RTA TC
          Rat Expression Set 230 1374568_at - -
          Rat Expression Set 230 1374568_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10886157 - -
          Rat Genome U34 Set rc_AA799726_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21652615 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1363151 - -

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          Host server : magellan-search-6659c69d8f-875ns:80/100.66.130.62:80.
          git-commit: 1827ea18100b76eacea45a9906e00cdefce2d263
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.30.1-2025.05.22-1.0