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          • Home
          • › Search Tool
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          • › Rn01530347_g1
          See other TRIM13 GE Assays ›
          Gene Symbol:
          Trim13
          Gene Name:
          tripartite motif-containing 13
          Gene Aliases:
          -
          Chromosome Location:
          Chr.15: 41927180 - 41936529 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01530347_g1
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Trim13
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001012210.1 NP_001012210.1 2 - 3 119 137
          XM_006252137.2 XP_006252199.1 2 - 3 206 137
          GenBank mRNA BC088425.1 - 2 - 3 119 137

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1500000626.rn.1

          Additional Information:

          This assay is in the 5'UTR region of the BC088425.1, NM_001012210.1, XM_006252137.2 transcripts.

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Detect Genomic DNA Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Trim13

          Gene Ontology Categories:

          Function(s) Process(es)

          signal transduction
          response to gamma radiation
          positive regulation of cell death
          positive regulation of macroautophagy
          ubiquitin-dependent ERAD pathway
          negative regulation of viral transcription
          positive regulation of I-kappaB kinase/NF-kappaB signaling
          proteasome-mediated ubiquitin-dependent protein catabolic process
          innate immune response
          positive regulation of NF-kappaB transcription factor activity
          protein autoubiquitination
          negative regulation of viral release from host cell
          ubiquitin-protein transferase activity
          zinc ion binding
          ligase activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P109977 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 204848 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 259842 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 629242 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 765961 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 700997 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 357400 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 22326 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P109977 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P109977 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P109977 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P109977 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 92011 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 76323 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10780929 - -
          Affymetrix Rat Gene 1.0 ST Array 10780930 - -
          Affymetrix Rat Gene 1.1 ST Array 10780924 - -
          Affymetrix Rat Clariom S Assay PSR1500004391.rn.1 TC1500000626.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1500004392.rn.1 TC1500000626.rn.1 RTA TC
          Affymetrix Rat Gene 1.0 ST Array 10780924 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22155216 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1376444 - -
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1376030 - -

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